Gene : Cagra.5131s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31 Genomic Order:  4
Name:  ? Cagra.5131s0004 Secondary Identifier:  ? PAC:28908152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5131s0004 0.5kb upstream 0.5kb upstream 2462 true Scaffold5131: 13036-15497 Capsella grandiflora
Cagra.5131s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5131: 14998-15497 Capsella grandiflora
Cagra.5131s0004 0.5kb downstream 0.5kb downstream 2462 true Scaffold5131: 12536-14997 Capsella grandiflora
Cagra.5131s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5131: 12536-13035 Capsella grandiflora
Cagra.5131s0004 1.0kb upstream 1.0kb upstream 2962 true Scaffold5131: 13036-15997 Capsella grandiflora
Cagra.5131s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5131: 14998-15997 Capsella grandiflora
Cagra.5131s0004 1.0kb downstream 1.0kb downstream 2962 true Scaffold5131: 12036-14997 Capsella grandiflora
Cagra.5131s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5131: 12036-13035 Capsella grandiflora
Cagra.5131s0004 2.0kb upstream 2.0kb upstream 3962 true Scaffold5131: 13036-16997 Capsella grandiflora
Cagra.5131s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5131: 14998-16997 Capsella grandiflora
Cagra.5131s0004 2.0kb downstream 2.0kb downstream 3962 true Scaffold5131: 11036-14997 Capsella grandiflora
Cagra.5131s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5131: 11036-13035 Capsella grandiflora
Cagra.5131s0004 5.0kb upstream 5.0kb upstream 6962 true Scaffold5131: 13036-19997 Capsella grandiflora
Cagra.5131s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5131: 14998-19997 Capsella grandiflora
Cagra.5131s0004 5.0kb downstream 5.0kb downstream 6962 true Scaffold5131: 8036-14997 Capsella grandiflora
Cagra.5131s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5131: 8036-13035 Capsella grandiflora
Cagra.5131s0004 10.0kb upstream 10.0kb upstream 11962 true Scaffold5131: 13036-24997 Capsella grandiflora
Cagra.5131s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5131: 14998-24997 Capsella grandiflora
Cagra.5131s0004 10.0kb downstream 10.0kb downstream 11962 true Scaffold5131: 3036-14997 Capsella grandiflora
Cagra.5131s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5131: 3036-13035 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373540 5261 Brassicaceae View MSA
123832817 5264 Brassicales-Malvales View MSA
124345635 5266 SBM View MSA
124237514 5268 Malvidae View MSA
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain