Gene : Cagra.5133s0001 C. grandiflora v1.1
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  1
Name:  ? Cagra.5133s0001 Secondary Identifier:  ? PAC:28915388
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ILEUDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-5137 Capsella grandiflora pathologic  
Cgrandiflora PWY-5138 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-6435 Capsella grandiflora pathologic  
Cgrandiflora PWY-6837 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora VALDEG-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5133s0001 0.5kb upstream 0.5kb upstream 5409 true Scaffold5133: 1186-6594 Capsella grandiflora
Cagra.5133s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5133: 1186-1685 Capsella grandiflora
Cagra.5133s0001 0.5kb downstream 0.5kb downstream 5409 true Scaffold5133: 1686-7094 Capsella grandiflora
Cagra.5133s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5133: 6595-7094 Capsella grandiflora
Cagra.5133s0001 1.0kb upstream 1.0kb upstream 5909 true Scaffold5133: 686-6594 Capsella grandiflora
Cagra.5133s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5133: 686-1685 Capsella grandiflora
Cagra.5133s0001 1.0kb downstream 1.0kb downstream 5909 true Scaffold5133: 1686-7594 Capsella grandiflora
Cagra.5133s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5133: 6595-7594 Capsella grandiflora
Cagra.5133s0001 2.0kb upstream 2.0kb upstream 6594 true Scaffold5133: 1-6594 Capsella grandiflora
Cagra.5133s0001 2.0kb upstream 2.0kb upstream 1685 false Scaffold5133: 1-1685 Capsella grandiflora
Cagra.5133s0001 2.0kb downstream 2.0kb downstream 6909 true Scaffold5133: 1686-8594 Capsella grandiflora
Cagra.5133s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5133: 6595-8594 Capsella grandiflora
Cagra.5133s0001 5.0kb upstream 5.0kb upstream 6594 true Scaffold5133: 1-6594 Capsella grandiflora
Cagra.5133s0001 5.0kb upstream 5.0kb upstream 1685 false Scaffold5133: 1-1685 Capsella grandiflora
Cagra.5133s0001 5.0kb downstream 5.0kb downstream 9909 true Scaffold5133: 1686-11594 Capsella grandiflora
Cagra.5133s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5133: 6595-11594 Capsella grandiflora
Cagra.5133s0001 10.0kb upstream 10.0kb upstream 6594 true Scaffold5133: 1-6594 Capsella grandiflora
Cagra.5133s0001 10.0kb upstream 10.0kb upstream 1685 false Scaffold5133: 1-1685 Capsella grandiflora
Cagra.5133s0001 10.0kb downstream 10.0kb downstream 14909 true Scaffold5133: 1686-16594 Capsella grandiflora
Cagra.5133s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5133: 6595-16594 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375346 5261 Brassicaceae View MSA
123827645 5264 Brassicales-Malvales View MSA
124340357 5266 SBM View MSA
124241390 5268 Malvidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain