Gene : Cagra.5163s0002 C. grandiflora v1.1
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  2
Name:  ? Cagra.5163s0002 Secondary Identifier:  ? PAC:28907183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5163s0002 0.5kb upstream 0.5kb upstream 2217 true Scaffold5163: 4140-6356 Capsella grandiflora
Cagra.5163s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5163: 5857-6356 Capsella grandiflora
Cagra.5163s0002 0.5kb downstream 0.5kb downstream 2217 true Scaffold5163: 3640-5856 Capsella grandiflora
Cagra.5163s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5163: 3640-4139 Capsella grandiflora
Cagra.5163s0002 1.0kb upstream 1.0kb upstream 2717 true Scaffold5163: 4140-6856 Capsella grandiflora
Cagra.5163s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5163: 5857-6856 Capsella grandiflora
Cagra.5163s0002 1.0kb downstream 1.0kb downstream 2717 true Scaffold5163: 3140-5856 Capsella grandiflora
Cagra.5163s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5163: 3140-4139 Capsella grandiflora
Cagra.5163s0002 2.0kb upstream 2.0kb upstream 3717 true Scaffold5163: 4140-7856 Capsella grandiflora
Cagra.5163s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5163: 5857-7856 Capsella grandiflora
Cagra.5163s0002 2.0kb downstream 2.0kb downstream 3717 true Scaffold5163: 2140-5856 Capsella grandiflora
Cagra.5163s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5163: 2140-4139 Capsella grandiflora
Cagra.5163s0002 5.0kb upstream 5.0kb upstream 6717 true Scaffold5163: 4140-10856 Capsella grandiflora
Cagra.5163s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5163: 5857-10856 Capsella grandiflora
Cagra.5163s0002 5.0kb downstream 5.0kb downstream 5856 true Scaffold5163: 1-5856 Capsella grandiflora
Cagra.5163s0002 5.0kb downstream 5.0kb downstream 4139 false Scaffold5163: 1-4139 Capsella grandiflora
Cagra.5163s0002 10.0kb upstream 10.0kb upstream 11717 true Scaffold5163: 4140-15856 Capsella grandiflora
Cagra.5163s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5163: 5857-15856 Capsella grandiflora
Cagra.5163s0002 10.0kb downstream 10.0kb downstream 5856 true Scaffold5163: 1-5856 Capsella grandiflora
Cagra.5163s0002 10.0kb downstream 10.0kb downstream 4139 false Scaffold5163: 1-4139 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371441 5261 Brassicaceae View MSA
123829134 5264 Brassicales-Malvales View MSA
124338451 5266 SBM View MSA
124239995 5268 Malvidae View MSA
124060931 5270 Rosid View MSA
123736448 5271 Pentapetalae View MSA
122790363 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain