Gene : Cagra.5163s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32010:SF6 - PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC Genomic Order:  10
Name:  ? Cagra.5163s0010 Secondary Identifier:  ? PAC:28907189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5163s0010 0.5kb upstream 0.5kb upstream 2970 true Scaffold5163: 49915-52884 Capsella grandiflora
Cagra.5163s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold5163: 49915-50414 Capsella grandiflora
Cagra.5163s0010 0.5kb downstream 0.5kb downstream 2970 true Scaffold5163: 50415-53384 Capsella grandiflora
Cagra.5163s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold5163: 52885-53384 Capsella grandiflora
Cagra.5163s0010 1.0kb upstream 1.0kb upstream 3470 true Scaffold5163: 49415-52884 Capsella grandiflora
Cagra.5163s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold5163: 49415-50414 Capsella grandiflora
Cagra.5163s0010 1.0kb downstream 1.0kb downstream 3470 true Scaffold5163: 50415-53884 Capsella grandiflora
Cagra.5163s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold5163: 52885-53884 Capsella grandiflora
Cagra.5163s0010 2.0kb upstream 2.0kb upstream 4470 true Scaffold5163: 48415-52884 Capsella grandiflora
Cagra.5163s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold5163: 48415-50414 Capsella grandiflora
Cagra.5163s0010 2.0kb downstream 2.0kb downstream 4470 true Scaffold5163: 50415-54884 Capsella grandiflora
Cagra.5163s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold5163: 52885-54884 Capsella grandiflora
Cagra.5163s0010 5.0kb upstream 5.0kb upstream 7470 true Scaffold5163: 45415-52884 Capsella grandiflora
Cagra.5163s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold5163: 45415-50414 Capsella grandiflora
Cagra.5163s0010 5.0kb downstream 5.0kb downstream 7470 true Scaffold5163: 50415-57884 Capsella grandiflora
Cagra.5163s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold5163: 52885-57884 Capsella grandiflora
Cagra.5163s0010 10.0kb upstream 10.0kb upstream 12470 true Scaffold5163: 40415-52884 Capsella grandiflora
Cagra.5163s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold5163: 40415-50414 Capsella grandiflora
Cagra.5163s0010 10.0kb downstream 10.0kb downstream 12470 true Scaffold5163: 50415-62884 Capsella grandiflora
Cagra.5163s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold5163: 52885-62884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373072 5261 Brassicaceae View MSA
123827429 5264 Brassicales-Malvales View MSA
124338928 5266 SBM View MSA
124238957 5268 Malvidae View MSA
124062574 5270 Rosid View MSA
123745532 5271 Pentapetalae View MSA
122793353 5272 Eudicot View MSA
122042393 5273 Angiosperm View MSA
121345735 5274 Embryophyte View MSA
123424958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain