Gene : Cagra.5059s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11139:SF72 - SERINE-PROTEIN KINASE ATM Genomic Order:  9
Name:  ? Cagra.5059s0009 Secondary Identifier:  ? PAC:28905641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5059s0009 0.5kb upstream 0.5kb upstream 30780 true Scaffold5059: 31050-61829 Capsella grandiflora
Cagra.5059s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5059: 61330-61829 Capsella grandiflora
Cagra.5059s0009 0.5kb downstream 0.5kb downstream 30780 true Scaffold5059: 30550-61329 Capsella grandiflora
Cagra.5059s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5059: 30550-31049 Capsella grandiflora
Cagra.5059s0009 1.0kb upstream 1.0kb upstream 31280 true Scaffold5059: 31050-62329 Capsella grandiflora
Cagra.5059s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5059: 61330-62329 Capsella grandiflora
Cagra.5059s0009 1.0kb downstream 1.0kb downstream 31280 true Scaffold5059: 30050-61329 Capsella grandiflora
Cagra.5059s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5059: 30050-31049 Capsella grandiflora
Cagra.5059s0009 2.0kb upstream 2.0kb upstream 32280 true Scaffold5059: 31050-63329 Capsella grandiflora
Cagra.5059s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold5059: 61330-63329 Capsella grandiflora
Cagra.5059s0009 2.0kb downstream 2.0kb downstream 32280 true Scaffold5059: 29050-61329 Capsella grandiflora
Cagra.5059s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5059: 29050-31049 Capsella grandiflora
Cagra.5059s0009 5.0kb upstream 5.0kb upstream 35280 true Scaffold5059: 31050-66329 Capsella grandiflora
Cagra.5059s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold5059: 61330-66329 Capsella grandiflora
Cagra.5059s0009 5.0kb downstream 5.0kb downstream 35280 true Scaffold5059: 26050-61329 Capsella grandiflora
Cagra.5059s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold5059: 26050-31049 Capsella grandiflora
Cagra.5059s0009 10.0kb upstream 10.0kb upstream 36783 true Scaffold5059: 31050-67832 Capsella grandiflora
Cagra.5059s0009 10.0kb upstream 10.0kb upstream 6503 false Scaffold5059: 61330-67832 Capsella grandiflora
Cagra.5059s0009 10.0kb downstream 10.0kb downstream 40280 true Scaffold5059: 21050-61329 Capsella grandiflora
Cagra.5059s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold5059: 21050-31049 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791338 5272 Eudicot View MSA
122376384 5261 Brassicaceae View MSA
123836304 5264 Brassicales-Malvales View MSA
124346303 5266 SBM View MSA
124243718 5268 Malvidae View MSA
124050304 5270 Rosid View MSA
123745497 5271 Pentapetalae View MSA
122048248 5273 Angiosperm View MSA
121343788 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain