Gene : Cagra.5070s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Genomic Order:  4
Name:  ? Cagra.5070s0004 Secondary Identifier:  ? PAC:28901590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5070s0004 0.5kb upstream 0.5kb upstream 4494 true Scaffold5070: 10886-15379 Capsella grandiflora
Cagra.5070s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5070: 10886-11385 Capsella grandiflora
Cagra.5070s0004 0.5kb downstream 0.5kb downstream 4494 true Scaffold5070: 11386-15879 Capsella grandiflora
Cagra.5070s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5070: 15380-15879 Capsella grandiflora
Cagra.5070s0004 1.0kb upstream 1.0kb upstream 4994 true Scaffold5070: 10386-15379 Capsella grandiflora
Cagra.5070s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5070: 10386-11385 Capsella grandiflora
Cagra.5070s0004 1.0kb downstream 1.0kb downstream 4994 true Scaffold5070: 11386-16379 Capsella grandiflora
Cagra.5070s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5070: 15380-16379 Capsella grandiflora
Cagra.5070s0004 2.0kb upstream 2.0kb upstream 5994 true Scaffold5070: 9386-15379 Capsella grandiflora
Cagra.5070s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5070: 9386-11385 Capsella grandiflora
Cagra.5070s0004 2.0kb downstream 2.0kb downstream 5994 true Scaffold5070: 11386-17379 Capsella grandiflora
Cagra.5070s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5070: 15380-17379 Capsella grandiflora
Cagra.5070s0004 5.0kb upstream 5.0kb upstream 8994 true Scaffold5070: 6386-15379 Capsella grandiflora
Cagra.5070s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5070: 6386-11385 Capsella grandiflora
Cagra.5070s0004 5.0kb downstream 5.0kb downstream 8994 true Scaffold5070: 11386-20379 Capsella grandiflora
Cagra.5070s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5070: 15380-20379 Capsella grandiflora
Cagra.5070s0004 10.0kb upstream 10.0kb upstream 13994 true Scaffold5070: 1386-15379 Capsella grandiflora
Cagra.5070s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5070: 1386-11385 Capsella grandiflora
Cagra.5070s0004 10.0kb downstream 10.0kb downstream 13994 true Scaffold5070: 11386-25379 Capsella grandiflora
Cagra.5070s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5070: 15380-25379 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373990 5261 Brassicaceae View MSA
123827998 5264 Brassicales-Malvales View MSA
124346804 5266 SBM View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain