Gene : Cagra.5070s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22912//PTHR22912:SF140 - DISULFIDE OXIDOREDUCTASE Genomic Order:  22
Name:  ? Cagra.5070s0022 Secondary Identifier:  ? PAC:28901605
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5070s0022 0.5kb upstream 0.5kb upstream 4232 true Scaffold5070: 94923-99154 Capsella grandiflora
Cagra.5070s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold5070: 94923-95422 Capsella grandiflora
Cagra.5070s0022 0.5kb downstream 0.5kb downstream 4232 true Scaffold5070: 95423-99654 Capsella grandiflora
Cagra.5070s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold5070: 99155-99654 Capsella grandiflora
Cagra.5070s0022 1.0kb upstream 1.0kb upstream 4732 true Scaffold5070: 94423-99154 Capsella grandiflora
Cagra.5070s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold5070: 94423-95422 Capsella grandiflora
Cagra.5070s0022 1.0kb downstream 1.0kb downstream 4519 true Scaffold5070: 95423-99941 Capsella grandiflora
Cagra.5070s0022 1.0kb downstream 1.0kb downstream 787 false Scaffold5070: 99155-99941 Capsella grandiflora
Cagra.5070s0022 2.0kb upstream 2.0kb upstream 5732 true Scaffold5070: 93423-99154 Capsella grandiflora
Cagra.5070s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold5070: 93423-95422 Capsella grandiflora
Cagra.5070s0022 2.0kb downstream 2.0kb downstream 4519 true Scaffold5070: 95423-99941 Capsella grandiflora
Cagra.5070s0022 2.0kb downstream 2.0kb downstream 787 false Scaffold5070: 99155-99941 Capsella grandiflora
Cagra.5070s0022 5.0kb upstream 5.0kb upstream 8732 true Scaffold5070: 90423-99154 Capsella grandiflora
Cagra.5070s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold5070: 90423-95422 Capsella grandiflora
Cagra.5070s0022 5.0kb downstream 5.0kb downstream 4519 true Scaffold5070: 95423-99941 Capsella grandiflora
Cagra.5070s0022 5.0kb downstream 5.0kb downstream 787 false Scaffold5070: 99155-99941 Capsella grandiflora
Cagra.5070s0022 10.0kb upstream 10.0kb upstream 13732 true Scaffold5070: 85423-99154 Capsella grandiflora
Cagra.5070s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold5070: 85423-95422 Capsella grandiflora
Cagra.5070s0022 10.0kb downstream 10.0kb downstream 4519 true Scaffold5070: 95423-99941 Capsella grandiflora
Cagra.5070s0022 10.0kb downstream 10.0kb downstream 787 false Scaffold5070: 99155-99941 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377484 5261 Brassicaceae View MSA
123827857 5264 Brassicales-Malvales View MSA
124343190 5266 SBM View MSA
124243492 5268 Malvidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain