Gene : Cagra.5198s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10693:SF29 - GB Genomic Order:  1
Name:  ? Cagra.5198s0001 Secondary Identifier:  ? PAC:28899637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5198s0001 0.5kb upstream 0.5kb upstream 3728 true Scaffold5198: 1-3728 Capsella grandiflora
Cagra.5198s0001 0.5kb upstream 0.5kb upstream 366 false Scaffold5198: 1-366 Capsella grandiflora
Cagra.5198s0001 0.5kb downstream 0.5kb downstream 3862 true Scaffold5198: 367-4228 Capsella grandiflora
Cagra.5198s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5198: 3729-4228 Capsella grandiflora
Cagra.5198s0001 1.0kb upstream 1.0kb upstream 3728 true Scaffold5198: 1-3728 Capsella grandiflora
Cagra.5198s0001 1.0kb upstream 1.0kb upstream 366 false Scaffold5198: 1-366 Capsella grandiflora
Cagra.5198s0001 1.0kb downstream 1.0kb downstream 4362 true Scaffold5198: 367-4728 Capsella grandiflora
Cagra.5198s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5198: 3729-4728 Capsella grandiflora
Cagra.5198s0001 2.0kb upstream 2.0kb upstream 3728 true Scaffold5198: 1-3728 Capsella grandiflora
Cagra.5198s0001 2.0kb upstream 2.0kb upstream 366 false Scaffold5198: 1-366 Capsella grandiflora
Cagra.5198s0001 2.0kb downstream 2.0kb downstream 5362 true Scaffold5198: 367-5728 Capsella grandiflora
Cagra.5198s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5198: 3729-5728 Capsella grandiflora
Cagra.5198s0001 5.0kb upstream 5.0kb upstream 3728 true Scaffold5198: 1-3728 Capsella grandiflora
Cagra.5198s0001 5.0kb upstream 5.0kb upstream 366 false Scaffold5198: 1-366 Capsella grandiflora
Cagra.5198s0001 5.0kb downstream 5.0kb downstream 8362 true Scaffold5198: 367-8728 Capsella grandiflora
Cagra.5198s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5198: 3729-8728 Capsella grandiflora
Cagra.5198s0001 10.0kb upstream 10.0kb upstream 3728 true Scaffold5198: 1-3728 Capsella grandiflora
Cagra.5198s0001 10.0kb upstream 10.0kb upstream 366 false Scaffold5198: 1-366 Capsella grandiflora
Cagra.5198s0001 10.0kb downstream 10.0kb downstream 13362 true Scaffold5198: 367-13728 Capsella grandiflora
Cagra.5198s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5198: 3729-13728 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344288 5261 Brassicaceae View MSA
123784314 5264 Brassicales-Malvales View MSA
124282501 5266 SBM View MSA
124253455 5268 Malvidae View MSA
124070794 5270 Rosid View MSA
123747329 5271 Pentapetalae View MSA
122793510 5272 Eudicot View MSA
122050704 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain