Gene : Cagra.5082s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22950:SF228 - AMINO ACID PERMEASE 7-RELATED Genomic Order:  1
Name:  ? Cagra.5082s0001 Secondary Identifier:  ? PAC:28912103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5082s0001 0.5kb upstream 0.5kb upstream 1668 true Scaffold5082: 569-2236 Capsella grandiflora
Cagra.5082s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5082: 569-1068 Capsella grandiflora
Cagra.5082s0001 0.5kb downstream 0.5kb downstream 1188 true Scaffold5082: 1069-2256 Capsella grandiflora
Cagra.5082s0001 0.5kb downstream 0.5kb downstream 20 false Scaffold5082: 2237-2256 Capsella grandiflora
Cagra.5082s0001 1.0kb upstream 1.0kb upstream 2168 true Scaffold5082: 69-2236 Capsella grandiflora
Cagra.5082s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5082: 69-1068 Capsella grandiflora
Cagra.5082s0001 1.0kb downstream 1.0kb downstream 1188 true Scaffold5082: 1069-2256 Capsella grandiflora
Cagra.5082s0001 1.0kb downstream 1.0kb downstream 20 false Scaffold5082: 2237-2256 Capsella grandiflora
Cagra.5082s0001 2.0kb upstream 2.0kb upstream 2236 true Scaffold5082: 1-2236 Capsella grandiflora
Cagra.5082s0001 2.0kb upstream 2.0kb upstream 1068 false Scaffold5082: 1-1068 Capsella grandiflora
Cagra.5082s0001 2.0kb downstream 2.0kb downstream 1188 true Scaffold5082: 1069-2256 Capsella grandiflora
Cagra.5082s0001 2.0kb downstream 2.0kb downstream 20 false Scaffold5082: 2237-2256 Capsella grandiflora
Cagra.5082s0001 5.0kb upstream 5.0kb upstream 2236 true Scaffold5082: 1-2236 Capsella grandiflora
Cagra.5082s0001 5.0kb upstream 5.0kb upstream 1068 false Scaffold5082: 1-1068 Capsella grandiflora
Cagra.5082s0001 5.0kb downstream 5.0kb downstream 1188 true Scaffold5082: 1069-2256 Capsella grandiflora
Cagra.5082s0001 5.0kb downstream 5.0kb downstream 20 false Scaffold5082: 2237-2256 Capsella grandiflora
Cagra.5082s0001 10.0kb upstream 10.0kb upstream 2236 true Scaffold5082: 1-2236 Capsella grandiflora
Cagra.5082s0001 10.0kb upstream 10.0kb upstream 1068 false Scaffold5082: 1-1068 Capsella grandiflora
Cagra.5082s0001 10.0kb downstream 10.0kb downstream 1188 true Scaffold5082: 1069-2256 Capsella grandiflora
Cagra.5082s0001 10.0kb downstream 10.0kb downstream 20 false Scaffold5082: 2237-2256 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333903 5261 Brassicaceae Singleton cluster - no MSA
123774799 5264 Brassicales-Malvales Singleton cluster - no MSA
124273221 5266 SBM Singleton cluster - no MSA
124249832 5268 Malvidae View MSA
124074784 5270 Rosid View MSA
123745911 5271 Pentapetalae View MSA
122771696 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain