Gene : Cagra.5105s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31920:SF18 - B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED Genomic Order:  3
Name:  ? Cagra.5105s0003 Secondary Identifier:  ? PAC:28905329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5105s0003 0.5kb upstream 0.5kb upstream 3636 true Scaffold5105: 12703-16338 Capsella grandiflora
Cagra.5105s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5105: 12703-13202 Capsella grandiflora
Cagra.5105s0003 0.5kb downstream 0.5kb downstream 3636 true Scaffold5105: 13203-16838 Capsella grandiflora
Cagra.5105s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5105: 16339-16838 Capsella grandiflora
Cagra.5105s0003 1.0kb upstream 1.0kb upstream 4136 true Scaffold5105: 12203-16338 Capsella grandiflora
Cagra.5105s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5105: 12203-13202 Capsella grandiflora
Cagra.5105s0003 1.0kb downstream 1.0kb downstream 4136 true Scaffold5105: 13203-17338 Capsella grandiflora
Cagra.5105s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5105: 16339-17338 Capsella grandiflora
Cagra.5105s0003 2.0kb upstream 2.0kb upstream 5136 true Scaffold5105: 11203-16338 Capsella grandiflora
Cagra.5105s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5105: 11203-13202 Capsella grandiflora
Cagra.5105s0003 2.0kb downstream 2.0kb downstream 5136 true Scaffold5105: 13203-18338 Capsella grandiflora
Cagra.5105s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5105: 16339-18338 Capsella grandiflora
Cagra.5105s0003 5.0kb upstream 5.0kb upstream 8136 true Scaffold5105: 8203-16338 Capsella grandiflora
Cagra.5105s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5105: 8203-13202 Capsella grandiflora
Cagra.5105s0003 5.0kb downstream 5.0kb downstream 8136 true Scaffold5105: 13203-21338 Capsella grandiflora
Cagra.5105s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5105: 16339-21338 Capsella grandiflora
Cagra.5105s0003 10.0kb upstream 10.0kb upstream 13136 true Scaffold5105: 3203-16338 Capsella grandiflora
Cagra.5105s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5105: 3203-13202 Capsella grandiflora
Cagra.5105s0003 10.0kb downstream 10.0kb downstream 8235 true Scaffold5105: 13203-21437 Capsella grandiflora
Cagra.5105s0003 10.0kb downstream 10.0kb downstream 5099 false Scaffold5105: 16339-21437 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362587 5261 Brassicaceae View MSA
123841668 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain