Gene : Cagra.5198s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10322:SF21 - DNA POLYMERASE ALPHA CATALYTIC SUBUNIT Genomic Order:  6
Name:  ? Cagra.5198s0006 Secondary Identifier:  ? PAC:28899643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5198s0006 0.5kb upstream 0.5kb upstream 8639 true Scaffold5198: 41965-50603 Capsella grandiflora
Cagra.5198s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5198: 41965-42464 Capsella grandiflora
Cagra.5198s0006 0.5kb downstream 0.5kb downstream 8639 true Scaffold5198: 42465-51103 Capsella grandiflora
Cagra.5198s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5198: 50604-51103 Capsella grandiflora
Cagra.5198s0006 1.0kb upstream 1.0kb upstream 9139 true Scaffold5198: 41465-50603 Capsella grandiflora
Cagra.5198s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5198: 41465-42464 Capsella grandiflora
Cagra.5198s0006 1.0kb downstream 1.0kb downstream 9139 true Scaffold5198: 42465-51603 Capsella grandiflora
Cagra.5198s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5198: 50604-51603 Capsella grandiflora
Cagra.5198s0006 2.0kb upstream 2.0kb upstream 10139 true Scaffold5198: 40465-50603 Capsella grandiflora
Cagra.5198s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5198: 40465-42464 Capsella grandiflora
Cagra.5198s0006 2.0kb downstream 2.0kb downstream 10139 true Scaffold5198: 42465-52603 Capsella grandiflora
Cagra.5198s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5198: 50604-52603 Capsella grandiflora
Cagra.5198s0006 5.0kb upstream 5.0kb upstream 13139 true Scaffold5198: 37465-50603 Capsella grandiflora
Cagra.5198s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5198: 37465-42464 Capsella grandiflora
Cagra.5198s0006 5.0kb downstream 5.0kb downstream 13139 true Scaffold5198: 42465-55603 Capsella grandiflora
Cagra.5198s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5198: 50604-55603 Capsella grandiflora
Cagra.5198s0006 10.0kb upstream 10.0kb upstream 18139 true Scaffold5198: 32465-50603 Capsella grandiflora
Cagra.5198s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5198: 32465-42464 Capsella grandiflora
Cagra.5198s0006 10.0kb downstream 10.0kb downstream 18139 true Scaffold5198: 42465-60603 Capsella grandiflora
Cagra.5198s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5198: 50604-60603 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381476 5261 Brassicaceae View MSA
123834167 5264 Brassicales-Malvales View MSA
124341481 5266 SBM View MSA
124236879 5268 Malvidae View MSA
124063602 5270 Rosid View MSA
123740668 5271 Pentapetalae View MSA
122786183 5272 Eudicot View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain