Gene : Cagra.5222s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31343:SF3 - GB Genomic Order:  1
Name:  ? Cagra.5222s0001 Secondary Identifier:  ? PAC:28896777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5222s0001 0.5kb upstream 0.5kb upstream 2525 true Scaffold5222: 3742-6266 Capsella grandiflora
Cagra.5222s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5222: 3742-4241 Capsella grandiflora
Cagra.5222s0001 0.5kb downstream 0.5kb downstream 2525 true Scaffold5222: 4242-6766 Capsella grandiflora
Cagra.5222s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5222: 6267-6766 Capsella grandiflora
Cagra.5222s0001 1.0kb upstream 1.0kb upstream 3025 true Scaffold5222: 3242-6266 Capsella grandiflora
Cagra.5222s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5222: 3242-4241 Capsella grandiflora
Cagra.5222s0001 1.0kb downstream 1.0kb downstream 3025 true Scaffold5222: 4242-7266 Capsella grandiflora
Cagra.5222s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5222: 6267-7266 Capsella grandiflora
Cagra.5222s0001 2.0kb upstream 2.0kb upstream 4025 true Scaffold5222: 2242-6266 Capsella grandiflora
Cagra.5222s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5222: 2242-4241 Capsella grandiflora
Cagra.5222s0001 2.0kb downstream 2.0kb downstream 4025 true Scaffold5222: 4242-8266 Capsella grandiflora
Cagra.5222s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5222: 6267-8266 Capsella grandiflora
Cagra.5222s0001 5.0kb upstream 5.0kb upstream 6266 true Scaffold5222: 1-6266 Capsella grandiflora
Cagra.5222s0001 5.0kb upstream 5.0kb upstream 4241 false Scaffold5222: 1-4241 Capsella grandiflora
Cagra.5222s0001 5.0kb downstream 5.0kb downstream 7025 true Scaffold5222: 4242-11266 Capsella grandiflora
Cagra.5222s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5222: 6267-11266 Capsella grandiflora
Cagra.5222s0001 10.0kb upstream 10.0kb upstream 6266 true Scaffold5222: 1-6266 Capsella grandiflora
Cagra.5222s0001 10.0kb upstream 10.0kb upstream 4241 false Scaffold5222: 1-4241 Capsella grandiflora
Cagra.5222s0001 10.0kb downstream 10.0kb downstream 12025 true Scaffold5222: 4242-16266 Capsella grandiflora
Cagra.5222s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5222: 6267-16266 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373030 5261 Brassicaceae View MSA
123830004 5264 Brassicales-Malvales View MSA
124339451 5266 SBM View MSA
124251276 5268 Malvidae View MSA
124067567 5270 Rosid View MSA
123743761 5271 Pentapetalae View MSA
122791281 5272 Eudicot View MSA
122049858 5273 Angiosperm View MSA
121311619 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain