Gene : Cagra.5222s0005 C. grandiflora v1.1
Defline:  (1 of 2) KOG0502//KOG4412 - Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) // 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  5
Name:  ? Cagra.5222s0005 Secondary Identifier:  ? PAC:28896784
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5222s0005 0.5kb upstream 0.5kb upstream 4241 true Scaffold5222: 22930-27170 Capsella grandiflora
Cagra.5222s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5222: 26671-27170 Capsella grandiflora
Cagra.5222s0005 0.5kb downstream 0.5kb downstream 4241 true Scaffold5222: 22430-26670 Capsella grandiflora
Cagra.5222s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5222: 22430-22929 Capsella grandiflora
Cagra.5222s0005 1.0kb upstream 1.0kb upstream 4741 true Scaffold5222: 22930-27670 Capsella grandiflora
Cagra.5222s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5222: 26671-27670 Capsella grandiflora
Cagra.5222s0005 1.0kb downstream 1.0kb downstream 4741 true Scaffold5222: 21930-26670 Capsella grandiflora
Cagra.5222s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5222: 21930-22929 Capsella grandiflora
Cagra.5222s0005 2.0kb upstream 2.0kb upstream 5741 true Scaffold5222: 22930-28670 Capsella grandiflora
Cagra.5222s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5222: 26671-28670 Capsella grandiflora
Cagra.5222s0005 2.0kb downstream 2.0kb downstream 5741 true Scaffold5222: 20930-26670 Capsella grandiflora
Cagra.5222s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5222: 20930-22929 Capsella grandiflora
Cagra.5222s0005 5.0kb upstream 5.0kb upstream 8741 true Scaffold5222: 22930-31670 Capsella grandiflora
Cagra.5222s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5222: 26671-31670 Capsella grandiflora
Cagra.5222s0005 5.0kb downstream 5.0kb downstream 8741 true Scaffold5222: 17930-26670 Capsella grandiflora
Cagra.5222s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5222: 17930-22929 Capsella grandiflora
Cagra.5222s0005 10.0kb upstream 10.0kb upstream 13741 true Scaffold5222: 22930-36670 Capsella grandiflora
Cagra.5222s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5222: 26671-36670 Capsella grandiflora
Cagra.5222s0005 10.0kb downstream 10.0kb downstream 13741 true Scaffold5222: 12930-26670 Capsella grandiflora
Cagra.5222s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5222: 12930-22929 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380543 5261 Brassicaceae View MSA
123802777 5264 Brassicales-Malvales View MSA
124351539 5266 SBM View MSA
124254584 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain