Gene : Cagra.5222s0008 C. grandiflora v1.1
Defline:  (1 of 10) PTHR24177:SF52 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.5222s0008 Secondary Identifier:  ? PAC:28896780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5222s0008 0.5kb upstream 0.5kb upstream 2726 true Scaffold5222: 34537-37262 Capsella grandiflora
Cagra.5222s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold5222: 36763-37262 Capsella grandiflora
Cagra.5222s0008 0.5kb downstream 0.5kb downstream 2726 true Scaffold5222: 34037-36762 Capsella grandiflora
Cagra.5222s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold5222: 34037-34536 Capsella grandiflora
Cagra.5222s0008 1.0kb upstream 1.0kb upstream 3226 true Scaffold5222: 34537-37762 Capsella grandiflora
Cagra.5222s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold5222: 36763-37762 Capsella grandiflora
Cagra.5222s0008 1.0kb downstream 1.0kb downstream 3226 true Scaffold5222: 33537-36762 Capsella grandiflora
Cagra.5222s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold5222: 33537-34536 Capsella grandiflora
Cagra.5222s0008 2.0kb upstream 2.0kb upstream 4226 true Scaffold5222: 34537-38762 Capsella grandiflora
Cagra.5222s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold5222: 36763-38762 Capsella grandiflora
Cagra.5222s0008 2.0kb downstream 2.0kb downstream 4226 true Scaffold5222: 32537-36762 Capsella grandiflora
Cagra.5222s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold5222: 32537-34536 Capsella grandiflora
Cagra.5222s0008 5.0kb upstream 5.0kb upstream 7226 true Scaffold5222: 34537-41762 Capsella grandiflora
Cagra.5222s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold5222: 36763-41762 Capsella grandiflora
Cagra.5222s0008 5.0kb downstream 5.0kb downstream 7226 true Scaffold5222: 29537-36762 Capsella grandiflora
Cagra.5222s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold5222: 29537-34536 Capsella grandiflora
Cagra.5222s0008 10.0kb upstream 10.0kb upstream 11880 true Scaffold5222: 34537-46416 Capsella grandiflora
Cagra.5222s0008 10.0kb upstream 10.0kb upstream 9654 false Scaffold5222: 36763-46416 Capsella grandiflora
Cagra.5222s0008 10.0kb downstream 10.0kb downstream 12226 true Scaffold5222: 24537-36762 Capsella grandiflora
Cagra.5222s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold5222: 24537-34536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380543 5261 Brassicaceae View MSA
123802777 5264 Brassicales-Malvales View MSA
124351539 5266 SBM View MSA
124254584 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain