Gene : Cagra.5118s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  9
Name:  ? Cagra.5118s0009 Secondary Identifier:  ? PAC:28905919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0009 0.5kb upstream 0.5kb upstream 2490 true Scaffold5118: 48031-50520 Capsella grandiflora
Cagra.5118s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 48031-48530 Capsella grandiflora
Cagra.5118s0009 0.5kb downstream 0.5kb downstream 2490 true Scaffold5118: 48531-51020 Capsella grandiflora
Cagra.5118s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 50521-51020 Capsella grandiflora
Cagra.5118s0009 1.0kb upstream 1.0kb upstream 2990 true Scaffold5118: 47531-50520 Capsella grandiflora
Cagra.5118s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 47531-48530 Capsella grandiflora
Cagra.5118s0009 1.0kb downstream 1.0kb downstream 2990 true Scaffold5118: 48531-51520 Capsella grandiflora
Cagra.5118s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 50521-51520 Capsella grandiflora
Cagra.5118s0009 2.0kb upstream 2.0kb upstream 3990 true Scaffold5118: 46531-50520 Capsella grandiflora
Cagra.5118s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 46531-48530 Capsella grandiflora
Cagra.5118s0009 2.0kb downstream 2.0kb downstream 3990 true Scaffold5118: 48531-52520 Capsella grandiflora
Cagra.5118s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 50521-52520 Capsella grandiflora
Cagra.5118s0009 5.0kb upstream 5.0kb upstream 6990 true Scaffold5118: 43531-50520 Capsella grandiflora
Cagra.5118s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 43531-48530 Capsella grandiflora
Cagra.5118s0009 5.0kb downstream 5.0kb downstream 6990 true Scaffold5118: 48531-55520 Capsella grandiflora
Cagra.5118s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 50521-55520 Capsella grandiflora
Cagra.5118s0009 10.0kb upstream 10.0kb upstream 11990 true Scaffold5118: 38531-50520 Capsella grandiflora
Cagra.5118s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 38531-48530 Capsella grandiflora
Cagra.5118s0009 10.0kb downstream 10.0kb downstream 11990 true Scaffold5118: 48531-60520 Capsella grandiflora
Cagra.5118s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold5118: 50521-60520 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377826 5261 Brassicaceae View MSA
123829119 5264 Brassicales-Malvales View MSA
124344857 5266 SBM View MSA
124253251 5268 Malvidae View MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain