Gene : Cagra.4960s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13107 - KARYOGAMY PROTEIN KAR4-RELATED Genomic Order:  1
Name:  ? Cagra.4960s0001 Secondary Identifier:  ? PAC:28911191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4960s0001 0.5kb upstream 0.5kb upstream 4869 true Scaffold4960: 1527-6395 Capsella grandiflora
Cagra.4960s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4960: 1527-2026 Capsella grandiflora
Cagra.4960s0001 0.5kb downstream 0.5kb downstream 4869 true Scaffold4960: 2027-6895 Capsella grandiflora
Cagra.4960s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4960: 6396-6895 Capsella grandiflora
Cagra.4960s0001 1.0kb upstream 1.0kb upstream 5369 true Scaffold4960: 1027-6395 Capsella grandiflora
Cagra.4960s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4960: 1027-2026 Capsella grandiflora
Cagra.4960s0001 1.0kb downstream 1.0kb downstream 5369 true Scaffold4960: 2027-7395 Capsella grandiflora
Cagra.4960s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4960: 6396-7395 Capsella grandiflora
Cagra.4960s0001 2.0kb upstream 2.0kb upstream 6369 true Scaffold4960: 27-6395 Capsella grandiflora
Cagra.4960s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4960: 27-2026 Capsella grandiflora
Cagra.4960s0001 2.0kb downstream 2.0kb downstream 6369 true Scaffold4960: 2027-8395 Capsella grandiflora
Cagra.4960s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4960: 6396-8395 Capsella grandiflora
Cagra.4960s0001 5.0kb upstream 5.0kb upstream 6395 true Scaffold4960: 1-6395 Capsella grandiflora
Cagra.4960s0001 5.0kb upstream 5.0kb upstream 2026 false Scaffold4960: 1-2026 Capsella grandiflora
Cagra.4960s0001 5.0kb downstream 5.0kb downstream 9369 true Scaffold4960: 2027-11395 Capsella grandiflora
Cagra.4960s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4960: 6396-11395 Capsella grandiflora
Cagra.4960s0001 10.0kb upstream 10.0kb upstream 6395 true Scaffold4960: 1-6395 Capsella grandiflora
Cagra.4960s0001 10.0kb upstream 10.0kb upstream 2026 false Scaffold4960: 1-2026 Capsella grandiflora
Cagra.4960s0001 10.0kb downstream 10.0kb downstream 14369 true Scaffold4960: 2027-16395 Capsella grandiflora
Cagra.4960s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4960: 6396-16395 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367847 5261 Brassicaceae View MSA
123831089 5264 Brassicales-Malvales View MSA
124342467 5266 SBM View MSA
124239999 5268 Malvidae View MSA
124068937 5270 Rosid View MSA
123737308 5271 Pentapetalae View MSA
122789765 5272 Eudicot View MSA
122041791 5273 Angiosperm View MSA
121349708 5274 Embryophyte View MSA
123428450 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain