Gene : Cagra.4961s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  7
Name:  ? Cagra.4961s0007 Secondary Identifier:  ? PAC:28915024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4961s0007 0.5kb upstream 0.5kb upstream 2863 true Scaffold4961: 38887-41749 Capsella grandiflora
Cagra.4961s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold4961: 41250-41749 Capsella grandiflora
Cagra.4961s0007 0.5kb downstream 0.5kb downstream 2863 true Scaffold4961: 38387-41249 Capsella grandiflora
Cagra.4961s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold4961: 38387-38886 Capsella grandiflora
Cagra.4961s0007 1.0kb upstream 1.0kb upstream 3363 true Scaffold4961: 38887-42249 Capsella grandiflora
Cagra.4961s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold4961: 41250-42249 Capsella grandiflora
Cagra.4961s0007 1.0kb downstream 1.0kb downstream 3363 true Scaffold4961: 37887-41249 Capsella grandiflora
Cagra.4961s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold4961: 37887-38886 Capsella grandiflora
Cagra.4961s0007 2.0kb upstream 2.0kb upstream 4363 true Scaffold4961: 38887-43249 Capsella grandiflora
Cagra.4961s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold4961: 41250-43249 Capsella grandiflora
Cagra.4961s0007 2.0kb downstream 2.0kb downstream 4363 true Scaffold4961: 36887-41249 Capsella grandiflora
Cagra.4961s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold4961: 36887-38886 Capsella grandiflora
Cagra.4961s0007 5.0kb upstream 5.0kb upstream 7363 true Scaffold4961: 38887-46249 Capsella grandiflora
Cagra.4961s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold4961: 41250-46249 Capsella grandiflora
Cagra.4961s0007 5.0kb downstream 5.0kb downstream 7363 true Scaffold4961: 33887-41249 Capsella grandiflora
Cagra.4961s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold4961: 33887-38886 Capsella grandiflora
Cagra.4961s0007 10.0kb upstream 10.0kb upstream 12363 true Scaffold4961: 38887-51249 Capsella grandiflora
Cagra.4961s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold4961: 41250-51249 Capsella grandiflora
Cagra.4961s0007 10.0kb downstream 10.0kb downstream 12363 true Scaffold4961: 28887-41249 Capsella grandiflora
Cagra.4961s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold4961: 28887-38886 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361060 5261 Brassicaceae View MSA
123831953 5264 Brassicales-Malvales View MSA
124341651 5266 SBM View MSA
124240177 5268 Malvidae View MSA
124067887 5270 Rosid View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain