Gene : Cagra.5013s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22942:SF15 - DNA REPAIR PROTEIN RAD51 HOMOLOG 2 Genomic Order:  9
Name:  ? Cagra.5013s0009 Secondary Identifier:  ? PAC:28904753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5013s0009 0.5kb upstream 0.5kb upstream 3303 true Scaffold5013: 38664-41966 Capsella grandiflora
Cagra.5013s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5013: 38664-39163 Capsella grandiflora
Cagra.5013s0009 0.5kb downstream 0.5kb downstream 3303 true Scaffold5013: 39164-42466 Capsella grandiflora
Cagra.5013s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5013: 41967-42466 Capsella grandiflora
Cagra.5013s0009 1.0kb upstream 1.0kb upstream 3803 true Scaffold5013: 38164-41966 Capsella grandiflora
Cagra.5013s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5013: 38164-39163 Capsella grandiflora
Cagra.5013s0009 1.0kb downstream 1.0kb downstream 3803 true Scaffold5013: 39164-42966 Capsella grandiflora
Cagra.5013s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5013: 41967-42966 Capsella grandiflora
Cagra.5013s0009 2.0kb upstream 2.0kb upstream 4803 true Scaffold5013: 37164-41966 Capsella grandiflora
Cagra.5013s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold5013: 37164-39163 Capsella grandiflora
Cagra.5013s0009 2.0kb downstream 2.0kb downstream 4803 true Scaffold5013: 39164-43966 Capsella grandiflora
Cagra.5013s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5013: 41967-43966 Capsella grandiflora
Cagra.5013s0009 5.0kb upstream 5.0kb upstream 7803 true Scaffold5013: 34164-41966 Capsella grandiflora
Cagra.5013s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold5013: 34164-39163 Capsella grandiflora
Cagra.5013s0009 5.0kb downstream 5.0kb downstream 5227 true Scaffold5013: 39164-44390 Capsella grandiflora
Cagra.5013s0009 5.0kb downstream 5.0kb downstream 2424 false Scaffold5013: 41967-44390 Capsella grandiflora
Cagra.5013s0009 10.0kb upstream 10.0kb upstream 12803 true Scaffold5013: 29164-41966 Capsella grandiflora
Cagra.5013s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold5013: 29164-39163 Capsella grandiflora
Cagra.5013s0009 10.0kb downstream 10.0kb downstream 5227 true Scaffold5013: 39164-44390 Capsella grandiflora
Cagra.5013s0009 10.0kb downstream 10.0kb downstream 2424 false Scaffold5013: 41967-44390 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378728 5261 Brassicaceae View MSA
123836957 5264 Brassicales-Malvales View MSA
124346922 5266 SBM View MSA
124246882 5268 Malvidae View MSA
124069440 5270 Rosid View MSA
123746796 5271 Pentapetalae View MSA
122794637 5272 Eudicot View MSA
122048884 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain