Gene : Cagra.5058s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32077:SF3 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 Genomic Order:  8
Name:  ? Cagra.5058s0008 Secondary Identifier:  ? PAC:28920188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5058s0008 0.5kb upstream 0.5kb upstream 2149 true Scaffold5058: 26446-28594 Capsella grandiflora
Cagra.5058s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold5058: 28095-28594 Capsella grandiflora
Cagra.5058s0008 0.5kb downstream 0.5kb downstream 2149 true Scaffold5058: 25946-28094 Capsella grandiflora
Cagra.5058s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold5058: 25946-26445 Capsella grandiflora
Cagra.5058s0008 1.0kb upstream 1.0kb upstream 2649 true Scaffold5058: 26446-29094 Capsella grandiflora
Cagra.5058s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold5058: 28095-29094 Capsella grandiflora
Cagra.5058s0008 1.0kb downstream 1.0kb downstream 2649 true Scaffold5058: 25446-28094 Capsella grandiflora
Cagra.5058s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold5058: 25446-26445 Capsella grandiflora
Cagra.5058s0008 2.0kb upstream 2.0kb upstream 3649 true Scaffold5058: 26446-30094 Capsella grandiflora
Cagra.5058s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold5058: 28095-30094 Capsella grandiflora
Cagra.5058s0008 2.0kb downstream 2.0kb downstream 3649 true Scaffold5058: 24446-28094 Capsella grandiflora
Cagra.5058s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold5058: 24446-26445 Capsella grandiflora
Cagra.5058s0008 5.0kb upstream 5.0kb upstream 6649 true Scaffold5058: 26446-33094 Capsella grandiflora
Cagra.5058s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold5058: 28095-33094 Capsella grandiflora
Cagra.5058s0008 5.0kb downstream 5.0kb downstream 6649 true Scaffold5058: 21446-28094 Capsella grandiflora
Cagra.5058s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold5058: 21446-26445 Capsella grandiflora
Cagra.5058s0008 10.0kb upstream 10.0kb upstream 11649 true Scaffold5058: 26446-38094 Capsella grandiflora
Cagra.5058s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold5058: 28095-38094 Capsella grandiflora
Cagra.5058s0008 10.0kb downstream 10.0kb downstream 11649 true Scaffold5058: 16446-28094 Capsella grandiflora
Cagra.5058s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold5058: 16446-26445 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374181 5261 Brassicaceae View MSA
123834021 5264 Brassicales-Malvales View MSA
124350835 5266 SBM View MSA
124253587 5268 Malvidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain