Gene : Cagra.4894s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10351 - TRANSCRIPTION FACTOR BTF3 Genomic Order:  20
Name:  ? Cagra.4894s0020 Secondary Identifier:  ? PAC:28894918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4894s0020 0.5kb upstream 0.5kb upstream 2233 true Scaffold4894: 89921-92153 Capsella grandiflora
Cagra.4894s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold4894: 89921-90420 Capsella grandiflora
Cagra.4894s0020 0.5kb downstream 0.5kb downstream 2233 true Scaffold4894: 90421-92653 Capsella grandiflora
Cagra.4894s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold4894: 92154-92653 Capsella grandiflora
Cagra.4894s0020 1.0kb upstream 1.0kb upstream 2733 true Scaffold4894: 89421-92153 Capsella grandiflora
Cagra.4894s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold4894: 89421-90420 Capsella grandiflora
Cagra.4894s0020 1.0kb downstream 1.0kb downstream 2733 true Scaffold4894: 90421-93153 Capsella grandiflora
Cagra.4894s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold4894: 92154-93153 Capsella grandiflora
Cagra.4894s0020 2.0kb upstream 2.0kb upstream 3733 true Scaffold4894: 88421-92153 Capsella grandiflora
Cagra.4894s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold4894: 88421-90420 Capsella grandiflora
Cagra.4894s0020 2.0kb downstream 2.0kb downstream 3733 true Scaffold4894: 90421-94153 Capsella grandiflora
Cagra.4894s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold4894: 92154-94153 Capsella grandiflora
Cagra.4894s0020 5.0kb upstream 5.0kb upstream 6733 true Scaffold4894: 85421-92153 Capsella grandiflora
Cagra.4894s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold4894: 85421-90420 Capsella grandiflora
Cagra.4894s0020 5.0kb downstream 5.0kb downstream 6733 true Scaffold4894: 90421-97153 Capsella grandiflora
Cagra.4894s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold4894: 92154-97153 Capsella grandiflora
Cagra.4894s0020 10.0kb upstream 10.0kb upstream 11733 true Scaffold4894: 80421-92153 Capsella grandiflora
Cagra.4894s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold4894: 80421-90420 Capsella grandiflora
Cagra.4894s0020 10.0kb downstream 10.0kb downstream 11733 true Scaffold4894: 90421-102153 Capsella grandiflora
Cagra.4894s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold4894: 92154-102153 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365685 5261 Brassicaceae View MSA
123836188 5264 Brassicales-Malvales View MSA
124343146 5266 SBM View MSA
124251473 5268 Malvidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain