Gene : Cagra.4902s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11903//PTHR11903:SF14 - PROSTAGLANDIN G/H SYNTHASE Genomic Order:  4
Name:  ? Cagra.4902s0004 Secondary Identifier:  ? PAC:28894156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4902s0004 0.5kb upstream 0.5kb upstream 3099 true Scaffold4902: 10030-13128 Capsella grandiflora
Cagra.4902s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4902: 12629-13128 Capsella grandiflora
Cagra.4902s0004 0.5kb downstream 0.5kb downstream 3099 true Scaffold4902: 9530-12628 Capsella grandiflora
Cagra.4902s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4902: 9530-10029 Capsella grandiflora
Cagra.4902s0004 1.0kb upstream 1.0kb upstream 3599 true Scaffold4902: 10030-13628 Capsella grandiflora
Cagra.4902s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4902: 12629-13628 Capsella grandiflora
Cagra.4902s0004 1.0kb downstream 1.0kb downstream 3599 true Scaffold4902: 9030-12628 Capsella grandiflora
Cagra.4902s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4902: 9030-10029 Capsella grandiflora
Cagra.4902s0004 2.0kb upstream 2.0kb upstream 4599 true Scaffold4902: 10030-14628 Capsella grandiflora
Cagra.4902s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4902: 12629-14628 Capsella grandiflora
Cagra.4902s0004 2.0kb downstream 2.0kb downstream 4599 true Scaffold4902: 8030-12628 Capsella grandiflora
Cagra.4902s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4902: 8030-10029 Capsella grandiflora
Cagra.4902s0004 5.0kb upstream 5.0kb upstream 7599 true Scaffold4902: 10030-17628 Capsella grandiflora
Cagra.4902s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4902: 12629-17628 Capsella grandiflora
Cagra.4902s0004 5.0kb downstream 5.0kb downstream 7599 true Scaffold4902: 5030-12628 Capsella grandiflora
Cagra.4902s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4902: 5030-10029 Capsella grandiflora
Cagra.4902s0004 10.0kb upstream 10.0kb upstream 12599 true Scaffold4902: 10030-22628 Capsella grandiflora
Cagra.4902s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4902: 12629-22628 Capsella grandiflora
Cagra.4902s0004 10.0kb downstream 10.0kb downstream 12599 true Scaffold4902: 30-12628 Capsella grandiflora
Cagra.4902s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4902: 30-10029 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658118 5273 Angiosperm View MSA
122333859 5261 Brassicaceae Singleton cluster - no MSA
123841950 5264 Brassicales-Malvales View MSA
124323139 5266 SBM View MSA
124255400 5268 Malvidae View MSA
124041209 5270 Rosid View MSA
123612177 5271 Pentapetalae View MSA
122646695 5272 Eudicot View MSA
120930129 5274 Embryophyte View MSA
122970661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain