Gene : Cagra.4909s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33596:SF1 - COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED Genomic Order:  17
Name:  ? Cagra.4909s0017 Secondary Identifier:  ? PAC:28904525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4909s0017 0.5kb upstream 0.5kb upstream 1583 true Scaffold4909: 68877-70459 Capsella grandiflora
Cagra.4909s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold4909: 69960-70459 Capsella grandiflora
Cagra.4909s0017 0.5kb downstream 0.5kb downstream 1583 true Scaffold4909: 68377-69959 Capsella grandiflora
Cagra.4909s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold4909: 68377-68876 Capsella grandiflora
Cagra.4909s0017 1.0kb upstream 1.0kb upstream 2083 true Scaffold4909: 68877-70959 Capsella grandiflora
Cagra.4909s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold4909: 69960-70959 Capsella grandiflora
Cagra.4909s0017 1.0kb downstream 1.0kb downstream 2083 true Scaffold4909: 67877-69959 Capsella grandiflora
Cagra.4909s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold4909: 67877-68876 Capsella grandiflora
Cagra.4909s0017 2.0kb upstream 2.0kb upstream 3083 true Scaffold4909: 68877-71959 Capsella grandiflora
Cagra.4909s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold4909: 69960-71959 Capsella grandiflora
Cagra.4909s0017 2.0kb downstream 2.0kb downstream 3083 true Scaffold4909: 66877-69959 Capsella grandiflora
Cagra.4909s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold4909: 66877-68876 Capsella grandiflora
Cagra.4909s0017 5.0kb upstream 5.0kb upstream 6083 true Scaffold4909: 68877-74959 Capsella grandiflora
Cagra.4909s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold4909: 69960-74959 Capsella grandiflora
Cagra.4909s0017 5.0kb downstream 5.0kb downstream 6083 true Scaffold4909: 63877-69959 Capsella grandiflora
Cagra.4909s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold4909: 63877-68876 Capsella grandiflora
Cagra.4909s0017 10.0kb upstream 10.0kb upstream 11083 true Scaffold4909: 68877-79959 Capsella grandiflora
Cagra.4909s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold4909: 69960-79959 Capsella grandiflora
Cagra.4909s0017 10.0kb downstream 10.0kb downstream 11083 true Scaffold4909: 58877-69959 Capsella grandiflora
Cagra.4909s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold4909: 58877-68876 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366593 5261 Brassicaceae View MSA
123837629 5264 Brassicales-Malvales View MSA
124338264 5266 SBM View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain