Gene : Cagra.4909s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10015:SF166 - HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  39
Name:  ? Cagra.4909s0039 Secondary Identifier:  ? PAC:28904543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4909s0039 0.5kb upstream 0.5kb upstream 2188 true Scaffold4909: 135559-137746 Capsella grandiflora
Cagra.4909s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold4909: 137247-137746 Capsella grandiflora
Cagra.4909s0039 0.5kb downstream 0.5kb downstream 2188 true Scaffold4909: 135059-137246 Capsella grandiflora
Cagra.4909s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold4909: 135059-135558 Capsella grandiflora
Cagra.4909s0039 1.0kb upstream 1.0kb upstream 2688 true Scaffold4909: 135559-138246 Capsella grandiflora
Cagra.4909s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold4909: 137247-138246 Capsella grandiflora
Cagra.4909s0039 1.0kb downstream 1.0kb downstream 2688 true Scaffold4909: 134559-137246 Capsella grandiflora
Cagra.4909s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold4909: 134559-135558 Capsella grandiflora
Cagra.4909s0039 2.0kb upstream 2.0kb upstream 3688 true Scaffold4909: 135559-139246 Capsella grandiflora
Cagra.4909s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold4909: 137247-139246 Capsella grandiflora
Cagra.4909s0039 2.0kb downstream 2.0kb downstream 3688 true Scaffold4909: 133559-137246 Capsella grandiflora
Cagra.4909s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold4909: 133559-135558 Capsella grandiflora
Cagra.4909s0039 5.0kb upstream 5.0kb upstream 6688 true Scaffold4909: 135559-142246 Capsella grandiflora
Cagra.4909s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold4909: 137247-142246 Capsella grandiflora
Cagra.4909s0039 5.0kb downstream 5.0kb downstream 6688 true Scaffold4909: 130559-137246 Capsella grandiflora
Cagra.4909s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold4909: 130559-135558 Capsella grandiflora
Cagra.4909s0039 10.0kb upstream 10.0kb upstream 11688 true Scaffold4909: 135559-147246 Capsella grandiflora
Cagra.4909s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold4909: 137247-147246 Capsella grandiflora
Cagra.4909s0039 10.0kb downstream 10.0kb downstream 11688 true Scaffold4909: 125559-137246 Capsella grandiflora
Cagra.4909s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold4909: 125559-135558 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373102 5261 Brassicaceae View MSA
123839033 5264 Brassicales-Malvales View MSA
124322541 5266 SBM View MSA
124246832 5268 Malvidae View MSA
124060729 5270 Rosid View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain