Gene : Cagra.4923s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR14467 - ARV1 Genomic Order:  2
Name:  ? Cagra.4923s0002 Secondary Identifier:  ? PAC:28911630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4923s0002 0.5kb upstream 0.5kb upstream 1288 true Scaffold4923: 1275-2562 Capsella grandiflora
Cagra.4923s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4923: 1275-1774 Capsella grandiflora
Cagra.4923s0002 0.5kb downstream 0.5kb downstream 1288 true Scaffold4923: 1775-3062 Capsella grandiflora
Cagra.4923s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4923: 2563-3062 Capsella grandiflora
Cagra.4923s0002 1.0kb upstream 1.0kb upstream 1788 true Scaffold4923: 775-2562 Capsella grandiflora
Cagra.4923s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4923: 775-1774 Capsella grandiflora
Cagra.4923s0002 1.0kb downstream 1.0kb downstream 1788 true Scaffold4923: 1775-3562 Capsella grandiflora
Cagra.4923s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4923: 2563-3562 Capsella grandiflora
Cagra.4923s0002 2.0kb upstream 2.0kb upstream 2562 true Scaffold4923: 1-2562 Capsella grandiflora
Cagra.4923s0002 2.0kb upstream 2.0kb upstream 1774 false Scaffold4923: 1-1774 Capsella grandiflora
Cagra.4923s0002 2.0kb downstream 2.0kb downstream 2788 true Scaffold4923: 1775-4562 Capsella grandiflora
Cagra.4923s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4923: 2563-4562 Capsella grandiflora
Cagra.4923s0002 5.0kb upstream 5.0kb upstream 2562 true Scaffold4923: 1-2562 Capsella grandiflora
Cagra.4923s0002 5.0kb upstream 5.0kb upstream 1774 false Scaffold4923: 1-1774 Capsella grandiflora
Cagra.4923s0002 5.0kb downstream 5.0kb downstream 5788 true Scaffold4923: 1775-7562 Capsella grandiflora
Cagra.4923s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4923: 2563-7562 Capsella grandiflora
Cagra.4923s0002 10.0kb upstream 10.0kb upstream 2562 true Scaffold4923: 1-2562 Capsella grandiflora
Cagra.4923s0002 10.0kb upstream 10.0kb upstream 1774 false Scaffold4923: 1-1774 Capsella grandiflora
Cagra.4923s0002 10.0kb downstream 10.0kb downstream 10788 true Scaffold4923: 1775-12562 Capsella grandiflora
Cagra.4923s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4923: 2563-12562 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782092 5273 Angiosperm View MSA
122333867 5261 Brassicaceae Singleton cluster - no MSA
123774765 5264 Brassicales-Malvales Singleton cluster - no MSA
124273190 5266 SBM Singleton cluster - no MSA
124249719 5268 Malvidae View MSA
124038278 5270 Rosid View MSA
123751855 5271 Pentapetalae View MSA
122774208 5272 Eudicot View MSA
121053631 5274 Embryophyte View MSA
123093645 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain