Gene : Cagra.4909s0053 C. grandiflora v1.1
Defline:  (1 of 11) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  53
Name:  ? Cagra.4909s0053 Secondary Identifier:  ? PAC:28904521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4909s0053 0.5kb upstream 0.5kb upstream 3326 true Scaffold4909: 204087-207412 Capsella grandiflora
Cagra.4909s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold4909: 206913-207412 Capsella grandiflora
Cagra.4909s0053 0.5kb downstream 0.5kb downstream 3326 true Scaffold4909: 203587-206912 Capsella grandiflora
Cagra.4909s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold4909: 203587-204086 Capsella grandiflora
Cagra.4909s0053 1.0kb upstream 1.0kb upstream 3826 true Scaffold4909: 204087-207912 Capsella grandiflora
Cagra.4909s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold4909: 206913-207912 Capsella grandiflora
Cagra.4909s0053 1.0kb downstream 1.0kb downstream 3826 true Scaffold4909: 203087-206912 Capsella grandiflora
Cagra.4909s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold4909: 203087-204086 Capsella grandiflora
Cagra.4909s0053 2.0kb upstream 2.0kb upstream 4826 true Scaffold4909: 204087-208912 Capsella grandiflora
Cagra.4909s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold4909: 206913-208912 Capsella grandiflora
Cagra.4909s0053 2.0kb downstream 2.0kb downstream 4826 true Scaffold4909: 202087-206912 Capsella grandiflora
Cagra.4909s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold4909: 202087-204086 Capsella grandiflora
Cagra.4909s0053 5.0kb upstream 5.0kb upstream 5966 true Scaffold4909: 204087-210052 Capsella grandiflora
Cagra.4909s0053 5.0kb upstream 5.0kb upstream 3140 false Scaffold4909: 206913-210052 Capsella grandiflora
Cagra.4909s0053 5.0kb downstream 5.0kb downstream 7826 true Scaffold4909: 199087-206912 Capsella grandiflora
Cagra.4909s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold4909: 199087-204086 Capsella grandiflora
Cagra.4909s0053 10.0kb upstream 10.0kb upstream 5966 true Scaffold4909: 204087-210052 Capsella grandiflora
Cagra.4909s0053 10.0kb upstream 10.0kb upstream 3140 false Scaffold4909: 206913-210052 Capsella grandiflora
Cagra.4909s0053 10.0kb downstream 10.0kb downstream 12826 true Scaffold4909: 194087-206912 Capsella grandiflora
Cagra.4909s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold4909: 194087-204086 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374095 5261 Brassicaceae View MSA
123838357 5264 Brassicales-Malvales View MSA
124346339 5266 SBM View MSA
124240332 5268 Malvidae View MSA
124070898 5270 Rosid View MSA
123745451 5271 Pentapetalae View MSA
122786314 5272 Eudicot View MSA
122043903 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310208 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain