Gene : Cagra.4701s0011 C. grandiflora v1.1
Defline:  (1 of 1) PF11016 - Protein of unknown function (DUF2854) (DUF2854) Genomic Order:  11
Name:  ? Cagra.4701s0011 Secondary Identifier:  ? PAC:28917223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4701s0011 0.5kb upstream 0.5kb upstream 2893 true Scaffold4701: 26981-29873 Capsella grandiflora
Cagra.4701s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4701: 26981-27480 Capsella grandiflora
Cagra.4701s0011 0.5kb downstream 0.5kb downstream 2893 true Scaffold4701: 27481-30373 Capsella grandiflora
Cagra.4701s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4701: 29874-30373 Capsella grandiflora
Cagra.4701s0011 1.0kb upstream 1.0kb upstream 3393 true Scaffold4701: 26481-29873 Capsella grandiflora
Cagra.4701s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4701: 26481-27480 Capsella grandiflora
Cagra.4701s0011 1.0kb downstream 1.0kb downstream 3393 true Scaffold4701: 27481-30873 Capsella grandiflora
Cagra.4701s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4701: 29874-30873 Capsella grandiflora
Cagra.4701s0011 2.0kb upstream 2.0kb upstream 4393 true Scaffold4701: 25481-29873 Capsella grandiflora
Cagra.4701s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4701: 25481-27480 Capsella grandiflora
Cagra.4701s0011 2.0kb downstream 2.0kb downstream 4393 true Scaffold4701: 27481-31873 Capsella grandiflora
Cagra.4701s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4701: 29874-31873 Capsella grandiflora
Cagra.4701s0011 5.0kb upstream 5.0kb upstream 7393 true Scaffold4701: 22481-29873 Capsella grandiflora
Cagra.4701s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4701: 22481-27480 Capsella grandiflora
Cagra.4701s0011 5.0kb downstream 5.0kb downstream 7393 true Scaffold4701: 27481-34873 Capsella grandiflora
Cagra.4701s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold4701: 29874-34873 Capsella grandiflora
Cagra.4701s0011 10.0kb upstream 10.0kb upstream 12393 true Scaffold4701: 17481-29873 Capsella grandiflora
Cagra.4701s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold4701: 17481-27480 Capsella grandiflora
Cagra.4701s0011 10.0kb downstream 10.0kb downstream 9446 true Scaffold4701: 27481-36926 Capsella grandiflora
Cagra.4701s0011 10.0kb downstream 10.0kb downstream 7053 false Scaffold4701: 29874-36926 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371774 5261 Brassicaceae View MSA
123829990 5264 Brassicales-Malvales View MSA
124341457 5266 SBM View MSA
124242423 5268 Malvidae View MSA
124061682 5270 Rosid View MSA
123746041 5271 Pentapetalae View MSA
122789084 5272 Eudicot View MSA
122043202 5273 Angiosperm View MSA
121344662 5274 Embryophyte View MSA
123425067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain