Gene : Cagra.4739s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  4
Name:  ? Cagra.4739s0004 Secondary Identifier:  ? PAC:28916730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4739s0004 0.5kb upstream 0.5kb upstream 1815 true Scaffold4739: 6517-8331 Capsella grandiflora
Cagra.4739s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4739: 7832-8331 Capsella grandiflora
Cagra.4739s0004 0.5kb downstream 0.5kb downstream 1815 true Scaffold4739: 6017-7831 Capsella grandiflora
Cagra.4739s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4739: 6017-6516 Capsella grandiflora
Cagra.4739s0004 1.0kb upstream 1.0kb upstream 2315 true Scaffold4739: 6517-8831 Capsella grandiflora
Cagra.4739s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4739: 7832-8831 Capsella grandiflora
Cagra.4739s0004 1.0kb downstream 1.0kb downstream 2315 true Scaffold4739: 5517-7831 Capsella grandiflora
Cagra.4739s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4739: 5517-6516 Capsella grandiflora
Cagra.4739s0004 2.0kb upstream 2.0kb upstream 3315 true Scaffold4739: 6517-9831 Capsella grandiflora
Cagra.4739s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4739: 7832-9831 Capsella grandiflora
Cagra.4739s0004 2.0kb downstream 2.0kb downstream 3315 true Scaffold4739: 4517-7831 Capsella grandiflora
Cagra.4739s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4739: 4517-6516 Capsella grandiflora
Cagra.4739s0004 5.0kb upstream 5.0kb upstream 6315 true Scaffold4739: 6517-12831 Capsella grandiflora
Cagra.4739s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4739: 7832-12831 Capsella grandiflora
Cagra.4739s0004 5.0kb downstream 5.0kb downstream 6315 true Scaffold4739: 1517-7831 Capsella grandiflora
Cagra.4739s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4739: 1517-6516 Capsella grandiflora
Cagra.4739s0004 10.0kb upstream 10.0kb upstream 11315 true Scaffold4739: 6517-17831 Capsella grandiflora
Cagra.4739s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4739: 7832-17831 Capsella grandiflora
Cagra.4739s0004 10.0kb downstream 10.0kb downstream 7831 true Scaffold4739: 1-7831 Capsella grandiflora
Cagra.4739s0004 10.0kb downstream 10.0kb downstream 6516 false Scaffold4739: 1-6516 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366194 5261 Brassicaceae View MSA
123836082 5264 Brassicales-Malvales View MSA
124337299 5266 SBM View MSA
124238755 5268 Malvidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain