Gene : Cagra.4739s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31803:SF10 - UBIQUINOL OXIDASE 4, CHLOROPLASTIC/CHROMOPLASTIC Genomic Order:  6
Name:  ? Cagra.4739s0006 Secondary Identifier:  ? PAC:28916726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4739s0006 0.5kb upstream 0.5kb upstream 3195 true Scaffold4739: 10760-13954 Capsella grandiflora
Cagra.4739s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4739: 13455-13954 Capsella grandiflora
Cagra.4739s0006 0.5kb downstream 0.5kb downstream 3195 true Scaffold4739: 10260-13454 Capsella grandiflora
Cagra.4739s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4739: 10260-10759 Capsella grandiflora
Cagra.4739s0006 1.0kb upstream 1.0kb upstream 3695 true Scaffold4739: 10760-14454 Capsella grandiflora
Cagra.4739s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4739: 13455-14454 Capsella grandiflora
Cagra.4739s0006 1.0kb downstream 1.0kb downstream 3695 true Scaffold4739: 9760-13454 Capsella grandiflora
Cagra.4739s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4739: 9760-10759 Capsella grandiflora
Cagra.4739s0006 2.0kb upstream 2.0kb upstream 4695 true Scaffold4739: 10760-15454 Capsella grandiflora
Cagra.4739s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4739: 13455-15454 Capsella grandiflora
Cagra.4739s0006 2.0kb downstream 2.0kb downstream 4695 true Scaffold4739: 8760-13454 Capsella grandiflora
Cagra.4739s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4739: 8760-10759 Capsella grandiflora
Cagra.4739s0006 5.0kb upstream 5.0kb upstream 7695 true Scaffold4739: 10760-18454 Capsella grandiflora
Cagra.4739s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4739: 13455-18454 Capsella grandiflora
Cagra.4739s0006 5.0kb downstream 5.0kb downstream 7695 true Scaffold4739: 5760-13454 Capsella grandiflora
Cagra.4739s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold4739: 5760-10759 Capsella grandiflora
Cagra.4739s0006 10.0kb upstream 10.0kb upstream 12695 true Scaffold4739: 10760-23454 Capsella grandiflora
Cagra.4739s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4739: 13455-23454 Capsella grandiflora
Cagra.4739s0006 10.0kb downstream 10.0kb downstream 12695 true Scaffold4739: 760-13454 Capsella grandiflora
Cagra.4739s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold4739: 760-10759 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374610 5261 Brassicaceae View MSA
123829410 5264 Brassicales-Malvales View MSA
124343914 5266 SBM View MSA
124237167 5268 Malvidae View MSA
124073832 5270 Rosid View MSA
123736785 5271 Pentapetalae View MSA
122786368 5272 Eudicot View MSA
122045919 5273 Angiosperm View MSA
121344765 5274 Embryophyte View MSA
123427941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain