Gene : Cagra.4845s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  1
Name:  ? Cagra.4845s0001 Secondary Identifier:  ? PAC:28909393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4845s0001 0.5kb upstream 0.5kb upstream 1770 true Scaffold4845: 237-2006 Capsella grandiflora
Cagra.4845s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4845: 1507-2006 Capsella grandiflora
Cagra.4845s0001 0.5kb downstream 0.5kb downstream 1506 true Scaffold4845: 1-1506 Capsella grandiflora
Cagra.4845s0001 0.5kb downstream 0.5kb downstream 236 false Scaffold4845: 1-236 Capsella grandiflora
Cagra.4845s0001 1.0kb upstream 1.0kb upstream 2270 true Scaffold4845: 237-2506 Capsella grandiflora
Cagra.4845s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4845: 1507-2506 Capsella grandiflora
Cagra.4845s0001 1.0kb downstream 1.0kb downstream 1506 true Scaffold4845: 1-1506 Capsella grandiflora
Cagra.4845s0001 1.0kb downstream 1.0kb downstream 236 false Scaffold4845: 1-236 Capsella grandiflora
Cagra.4845s0001 2.0kb upstream 2.0kb upstream 3270 true Scaffold4845: 237-3506 Capsella grandiflora
Cagra.4845s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4845: 1507-3506 Capsella grandiflora
Cagra.4845s0001 2.0kb downstream 2.0kb downstream 1506 true Scaffold4845: 1-1506 Capsella grandiflora
Cagra.4845s0001 2.0kb downstream 2.0kb downstream 236 false Scaffold4845: 1-236 Capsella grandiflora
Cagra.4845s0001 5.0kb upstream 5.0kb upstream 6270 true Scaffold4845: 237-6506 Capsella grandiflora
Cagra.4845s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4845: 1507-6506 Capsella grandiflora
Cagra.4845s0001 5.0kb downstream 5.0kb downstream 1506 true Scaffold4845: 1-1506 Capsella grandiflora
Cagra.4845s0001 5.0kb downstream 5.0kb downstream 236 false Scaffold4845: 1-236 Capsella grandiflora
Cagra.4845s0001 10.0kb upstream 10.0kb upstream 11270 true Scaffold4845: 237-11506 Capsella grandiflora
Cagra.4845s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold4845: 1507-11506 Capsella grandiflora
Cagra.4845s0001 10.0kb downstream 10.0kb downstream 1506 true Scaffold4845: 1-1506 Capsella grandiflora
Cagra.4845s0001 10.0kb downstream 10.0kb downstream 236 false Scaffold4845: 1-236 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360707 5261 Brassicaceae View MSA
123840211 5264 Brassicales-Malvales View MSA
124349634 5266 SBM View MSA
124254131 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain