Gene : Cagra.4845s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  11
Name:  ? Cagra.4845s0011 Secondary Identifier:  ? PAC:28909392
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5723 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4845s0011 0.5kb upstream 0.5kb upstream 3389 true Scaffold4845: 61418-64806 Capsella grandiflora
Cagra.4845s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4845: 64307-64806 Capsella grandiflora
Cagra.4845s0011 0.5kb downstream 0.5kb downstream 3389 true Scaffold4845: 60918-64306 Capsella grandiflora
Cagra.4845s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4845: 60918-61417 Capsella grandiflora
Cagra.4845s0011 1.0kb upstream 1.0kb upstream 3889 true Scaffold4845: 61418-65306 Capsella grandiflora
Cagra.4845s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4845: 64307-65306 Capsella grandiflora
Cagra.4845s0011 1.0kb downstream 1.0kb downstream 3889 true Scaffold4845: 60418-64306 Capsella grandiflora
Cagra.4845s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4845: 60418-61417 Capsella grandiflora
Cagra.4845s0011 2.0kb upstream 2.0kb upstream 4889 true Scaffold4845: 61418-66306 Capsella grandiflora
Cagra.4845s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4845: 64307-66306 Capsella grandiflora
Cagra.4845s0011 2.0kb downstream 2.0kb downstream 4889 true Scaffold4845: 59418-64306 Capsella grandiflora
Cagra.4845s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4845: 59418-61417 Capsella grandiflora
Cagra.4845s0011 5.0kb upstream 5.0kb upstream 7889 true Scaffold4845: 61418-69306 Capsella grandiflora
Cagra.4845s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4845: 64307-69306 Capsella grandiflora
Cagra.4845s0011 5.0kb downstream 5.0kb downstream 7889 true Scaffold4845: 56418-64306 Capsella grandiflora
Cagra.4845s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold4845: 56418-61417 Capsella grandiflora
Cagra.4845s0011 10.0kb upstream 10.0kb upstream 11460 true Scaffold4845: 61418-72877 Capsella grandiflora
Cagra.4845s0011 10.0kb upstream 10.0kb upstream 8571 false Scaffold4845: 64307-72877 Capsella grandiflora
Cagra.4845s0011 10.0kb downstream 10.0kb downstream 12889 true Scaffold4845: 51418-64306 Capsella grandiflora
Cagra.4845s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold4845: 51418-61417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361118 5261 Brassicaceae View MSA
123830504 5264 Brassicales-Malvales View MSA
124343810 5266 SBM View MSA
124241704 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain