Gene : Cagra.4554s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR12281 - RP42 RELATED Genomic Order:  4
Name:  ? Cagra.4554s0004 Secondary Identifier:  ? PAC:28912291
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4554s0004 0.5kb upstream 0.5kb upstream 2677 true Scaffold4554: 10660-13336 Capsella grandiflora
Cagra.4554s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4554: 10660-11159 Capsella grandiflora
Cagra.4554s0004 0.5kb downstream 0.5kb downstream 2677 true Scaffold4554: 11160-13836 Capsella grandiflora
Cagra.4554s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4554: 13337-13836 Capsella grandiflora
Cagra.4554s0004 1.0kb upstream 1.0kb upstream 3177 true Scaffold4554: 10160-13336 Capsella grandiflora
Cagra.4554s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4554: 10160-11159 Capsella grandiflora
Cagra.4554s0004 1.0kb downstream 1.0kb downstream 3177 true Scaffold4554: 11160-14336 Capsella grandiflora
Cagra.4554s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4554: 13337-14336 Capsella grandiflora
Cagra.4554s0004 2.0kb upstream 2.0kb upstream 4177 true Scaffold4554: 9160-13336 Capsella grandiflora
Cagra.4554s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4554: 9160-11159 Capsella grandiflora
Cagra.4554s0004 2.0kb downstream 2.0kb downstream 4177 true Scaffold4554: 11160-15336 Capsella grandiflora
Cagra.4554s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4554: 13337-15336 Capsella grandiflora
Cagra.4554s0004 5.0kb upstream 5.0kb upstream 7177 true Scaffold4554: 6160-13336 Capsella grandiflora
Cagra.4554s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4554: 6160-11159 Capsella grandiflora
Cagra.4554s0004 5.0kb downstream 5.0kb downstream 7177 true Scaffold4554: 11160-18336 Capsella grandiflora
Cagra.4554s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4554: 13337-18336 Capsella grandiflora
Cagra.4554s0004 10.0kb upstream 10.0kb upstream 12177 true Scaffold4554: 1160-13336 Capsella grandiflora
Cagra.4554s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4554: 1160-11159 Capsella grandiflora
Cagra.4554s0004 10.0kb downstream 10.0kb downstream 10207 true Scaffold4554: 11160-21366 Capsella grandiflora
Cagra.4554s0004 10.0kb downstream 10.0kb downstream 8030 false Scaffold4554: 13337-21366 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363917 5261 Brassicaceae View MSA
123833622 5264 Brassicales-Malvales View MSA
124338545 5266 SBM View MSA
124253425 5268 Malvidae View MSA
124067795 5270 Rosid View MSA
123739040 5271 Pentapetalae View MSA
122788388 5272 Eudicot View MSA
122049788 5273 Angiosperm View MSA
121347984 5274 Embryophyte View MSA
123426015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain