Gene : Cagra.4622s0004 C. grandiflora v1.1

Defline:  (1 of 9) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  4
Name:  ? Cagra.4622s0004 Secondary Identifier:  ? PAC:28897770

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4622s0004 0.5kb upstream 0.5kb upstream 2175 true Scaffold4622: 7295-9469 Capsella grandiflora
Cagra.4622s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4622: 8970-9469 Capsella grandiflora
Cagra.4622s0004 0.5kb downstream 0.5kb downstream 2175 true Scaffold4622: 6795-8969 Capsella grandiflora
Cagra.4622s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4622: 6795-7294 Capsella grandiflora
Cagra.4622s0004 1.0kb upstream 1.0kb upstream 2675 true Scaffold4622: 7295-9969 Capsella grandiflora
Cagra.4622s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4622: 8970-9969 Capsella grandiflora
Cagra.4622s0004 1.0kb downstream 1.0kb downstream 2675 true Scaffold4622: 6295-8969 Capsella grandiflora
Cagra.4622s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4622: 6295-7294 Capsella grandiflora
Cagra.4622s0004 2.0kb upstream 2.0kb upstream 3675 true Scaffold4622: 7295-10969 Capsella grandiflora
Cagra.4622s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4622: 8970-10969 Capsella grandiflora
Cagra.4622s0004 2.0kb downstream 2.0kb downstream 3675 true Scaffold4622: 5295-8969 Capsella grandiflora
Cagra.4622s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4622: 5295-7294 Capsella grandiflora
Cagra.4622s0004 5.0kb upstream 5.0kb upstream 6675 true Scaffold4622: 7295-13969 Capsella grandiflora
Cagra.4622s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4622: 8970-13969 Capsella grandiflora
Cagra.4622s0004 5.0kb downstream 5.0kb downstream 6675 true Scaffold4622: 2295-8969 Capsella grandiflora
Cagra.4622s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4622: 2295-7294 Capsella grandiflora
Cagra.4622s0004 10.0kb upstream 10.0kb upstream 11675 true Scaffold4622: 7295-18969 Capsella grandiflora
Cagra.4622s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4622: 8970-18969 Capsella grandiflora
Cagra.4622s0004 10.0kb downstream 10.0kb downstream 8969 true Scaffold4622: 1-8969 Capsella grandiflora
Cagra.4622s0004 10.0kb downstream 10.0kb downstream 7294 false Scaffold4622: 1-7294 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122371495 5261 Brassicaceae View MSA
123835960 5264 Brassicales-Malvales View MSA
124343630 5266 SBM View MSA
124251342 5268 Malvidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain