Gene : Cagra.4622s0003 C. grandiflora v1.1
Genomic Order:  3 Name:  ? Cagra.4622s0003
Secondary Identifier:  ? PAC:28897767
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4622s0003 0.5kb upstream 0.5kb upstream 2970 true Scaffold4622: 4420-7389 Capsella grandiflora
Cagra.4622s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4622: 6890-7389 Capsella grandiflora
Cagra.4622s0003 0.5kb downstream 0.5kb downstream 2970 true Scaffold4622: 3920-6889 Capsella grandiflora
Cagra.4622s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4622: 3920-4419 Capsella grandiflora
Cagra.4622s0003 1.0kb upstream 1.0kb upstream 3470 true Scaffold4622: 4420-7889 Capsella grandiflora
Cagra.4622s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4622: 6890-7889 Capsella grandiflora
Cagra.4622s0003 1.0kb downstream 1.0kb downstream 3470 true Scaffold4622: 3420-6889 Capsella grandiflora
Cagra.4622s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4622: 3420-4419 Capsella grandiflora
Cagra.4622s0003 2.0kb upstream 2.0kb upstream 4470 true Scaffold4622: 4420-8889 Capsella grandiflora
Cagra.4622s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4622: 6890-8889 Capsella grandiflora
Cagra.4622s0003 2.0kb downstream 2.0kb downstream 4470 true Scaffold4622: 2420-6889 Capsella grandiflora
Cagra.4622s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4622: 2420-4419 Capsella grandiflora
Cagra.4622s0003 5.0kb upstream 5.0kb upstream 7470 true Scaffold4622: 4420-11889 Capsella grandiflora
Cagra.4622s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4622: 6890-11889 Capsella grandiflora
Cagra.4622s0003 5.0kb downstream 5.0kb downstream 6889 true Scaffold4622: 1-6889 Capsella grandiflora
Cagra.4622s0003 5.0kb downstream 5.0kb downstream 4419 false Scaffold4622: 1-4419 Capsella grandiflora
Cagra.4622s0003 10.0kb upstream 10.0kb upstream 12470 true Scaffold4622: 4420-16889 Capsella grandiflora
Cagra.4622s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4622: 6890-16889 Capsella grandiflora
Cagra.4622s0003 10.0kb downstream 10.0kb downstream 6889 true Scaffold4622: 1-6889 Capsella grandiflora
Cagra.4622s0003 10.0kb downstream 10.0kb downstream 4419 false Scaffold4622: 1-4419 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371344 5261 Brassicaceae View MSA
123832465 5264 Brassicales-Malvales View MSA
124342967 5266 SBM View MSA
124252001 5268 Malvidae View MSA
124065299 5270 Rosid View MSA
123737412 5271 Pentapetalae View MSA
122788716 5272 Eudicot View MSA
122046117 5273 Angiosperm View MSA
121310558 5274 Embryophyte View MSA
123348011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain