Gene : Cagra.4643s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24356:SF212 - AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.4643s0001 Secondary Identifier:  ? PAC:28920148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4643s0001 0.5kb upstream 0.5kb upstream 5416 true Scaffold4643: 21-5436 Capsella grandiflora
Cagra.4643s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4643: 4937-5436 Capsella grandiflora
Cagra.4643s0001 0.5kb downstream 0.5kb downstream 4936 true Scaffold4643: 1-4936 Capsella grandiflora
Cagra.4643s0001 0.5kb downstream 0.5kb downstream 20 false Scaffold4643: 1-20 Capsella grandiflora
Cagra.4643s0001 1.0kb upstream 1.0kb upstream 5916 true Scaffold4643: 21-5936 Capsella grandiflora
Cagra.4643s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4643: 4937-5936 Capsella grandiflora
Cagra.4643s0001 1.0kb downstream 1.0kb downstream 4936 true Scaffold4643: 1-4936 Capsella grandiflora
Cagra.4643s0001 1.0kb downstream 1.0kb downstream 20 false Scaffold4643: 1-20 Capsella grandiflora
Cagra.4643s0001 2.0kb upstream 2.0kb upstream 6916 true Scaffold4643: 21-6936 Capsella grandiflora
Cagra.4643s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4643: 4937-6936 Capsella grandiflora
Cagra.4643s0001 2.0kb downstream 2.0kb downstream 4936 true Scaffold4643: 1-4936 Capsella grandiflora
Cagra.4643s0001 2.0kb downstream 2.0kb downstream 20 false Scaffold4643: 1-20 Capsella grandiflora
Cagra.4643s0001 5.0kb upstream 5.0kb upstream 9916 true Scaffold4643: 21-9936 Capsella grandiflora
Cagra.4643s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4643: 4937-9936 Capsella grandiflora
Cagra.4643s0001 5.0kb downstream 5.0kb downstream 4936 true Scaffold4643: 1-4936 Capsella grandiflora
Cagra.4643s0001 5.0kb downstream 5.0kb downstream 20 false Scaffold4643: 1-20 Capsella grandiflora
Cagra.4643s0001 10.0kb upstream 10.0kb upstream 14916 true Scaffold4643: 21-14936 Capsella grandiflora
Cagra.4643s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold4643: 4937-14936 Capsella grandiflora
Cagra.4643s0001 10.0kb downstream 10.0kb downstream 4936 true Scaffold4643: 1-4936 Capsella grandiflora
Cagra.4643s0001 10.0kb downstream 10.0kb downstream 20 false Scaffold4643: 1-20 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367825 5261 Brassicaceae View MSA
123835026 5264 Brassicales-Malvales View MSA
124349704 5266 SBM View MSA
124253110 5268 Malvidae View MSA
124067637 5270 Rosid View MSA
123746208 5271 Pentapetalae View MSA
122793810 5272 Eudicot View MSA
122048734 5273 Angiosperm View MSA
121346247 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain