Gene : Cagra.4643s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.4643s0004 Secondary Identifier:  ? PAC:28920147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4643s0004 0.5kb upstream 0.5kb upstream 4378 true Scaffold4643: 14167-18544 Capsella grandiflora
Cagra.4643s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4643: 18045-18544 Capsella grandiflora
Cagra.4643s0004 0.5kb downstream 0.5kb downstream 4378 true Scaffold4643: 13667-18044 Capsella grandiflora
Cagra.4643s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4643: 13667-14166 Capsella grandiflora
Cagra.4643s0004 1.0kb upstream 1.0kb upstream 4878 true Scaffold4643: 14167-19044 Capsella grandiflora
Cagra.4643s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4643: 18045-19044 Capsella grandiflora
Cagra.4643s0004 1.0kb downstream 1.0kb downstream 4878 true Scaffold4643: 13167-18044 Capsella grandiflora
Cagra.4643s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4643: 13167-14166 Capsella grandiflora
Cagra.4643s0004 2.0kb upstream 2.0kb upstream 5878 true Scaffold4643: 14167-20044 Capsella grandiflora
Cagra.4643s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4643: 18045-20044 Capsella grandiflora
Cagra.4643s0004 2.0kb downstream 2.0kb downstream 5878 true Scaffold4643: 12167-18044 Capsella grandiflora
Cagra.4643s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4643: 12167-14166 Capsella grandiflora
Cagra.4643s0004 5.0kb upstream 5.0kb upstream 8878 true Scaffold4643: 14167-23044 Capsella grandiflora
Cagra.4643s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4643: 18045-23044 Capsella grandiflora
Cagra.4643s0004 5.0kb downstream 5.0kb downstream 8878 true Scaffold4643: 9167-18044 Capsella grandiflora
Cagra.4643s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4643: 9167-14166 Capsella grandiflora
Cagra.4643s0004 10.0kb upstream 10.0kb upstream 13878 true Scaffold4643: 14167-28044 Capsella grandiflora
Cagra.4643s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4643: 18045-28044 Capsella grandiflora
Cagra.4643s0004 10.0kb downstream 10.0kb downstream 13878 true Scaffold4643: 4167-18044 Capsella grandiflora
Cagra.4643s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4643: 4167-14166 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377963 5261 Brassicaceae View MSA
123831510 5264 Brassicales-Malvales View MSA
124341613 5266 SBM View MSA
124242690 5268 Malvidae View MSA
124062740 5270 Rosid View MSA
123737829 5271 Pentapetalae View MSA
122791575 5272 Eudicot View MSA
122049319 5273 Angiosperm View MSA
121311340 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain