Gene : Cagra.4686s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  2
Name:  ? Cagra.4686s0002 Secondary Identifier:  ? PAC:28920140
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4686s0002 0.5kb upstream 0.5kb upstream 5434 true Scaffold4686: 3542-8975 Capsella grandiflora
Cagra.4686s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4686: 8476-8975 Capsella grandiflora
Cagra.4686s0002 0.5kb downstream 0.5kb downstream 5434 true Scaffold4686: 3042-8475 Capsella grandiflora
Cagra.4686s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4686: 3042-3541 Capsella grandiflora
Cagra.4686s0002 1.0kb upstream 1.0kb upstream 5934 true Scaffold4686: 3542-9475 Capsella grandiflora
Cagra.4686s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4686: 8476-9475 Capsella grandiflora
Cagra.4686s0002 1.0kb downstream 1.0kb downstream 5934 true Scaffold4686: 2542-8475 Capsella grandiflora
Cagra.4686s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4686: 2542-3541 Capsella grandiflora
Cagra.4686s0002 2.0kb upstream 2.0kb upstream 6934 true Scaffold4686: 3542-10475 Capsella grandiflora
Cagra.4686s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4686: 8476-10475 Capsella grandiflora
Cagra.4686s0002 2.0kb downstream 2.0kb downstream 6934 true Scaffold4686: 1542-8475 Capsella grandiflora
Cagra.4686s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4686: 1542-3541 Capsella grandiflora
Cagra.4686s0002 5.0kb upstream 5.0kb upstream 9934 true Scaffold4686: 3542-13475 Capsella grandiflora
Cagra.4686s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4686: 8476-13475 Capsella grandiflora
Cagra.4686s0002 5.0kb downstream 5.0kb downstream 8475 true Scaffold4686: 1-8475 Capsella grandiflora
Cagra.4686s0002 5.0kb downstream 5.0kb downstream 3541 false Scaffold4686: 1-3541 Capsella grandiflora
Cagra.4686s0002 10.0kb upstream 10.0kb upstream 14934 true Scaffold4686: 3542-18475 Capsella grandiflora
Cagra.4686s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4686: 8476-18475 Capsella grandiflora
Cagra.4686s0002 10.0kb downstream 10.0kb downstream 8475 true Scaffold4686: 1-8475 Capsella grandiflora
Cagra.4686s0002 10.0kb downstream 10.0kb downstream 3541 false Scaffold4686: 1-3541 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122366855 5261 Brassicaceae View MSA
123828131 5264 Brassicales-Malvales View MSA
124340268 5266 SBM View MSA
124241135 5268 Malvidae View MSA
124066368 5270 Rosid View MSA
123738623 5271 Pentapetalae View MSA
122790616 5272 Eudicot View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain