Gene : Cagra.4686s0009 C. grandiflora v1.1
Defline:  (1 of 8) PTHR21470 - NTKL-BINDING PROTEIN 1 Genomic Order:  9
Name:  ? Cagra.4686s0009 Secondary Identifier:  ? PAC:28920134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4686s0009 0.5kb upstream 0.5kb upstream 2687 true Scaffold4686: 33366-36052 Capsella grandiflora
Cagra.4686s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold4686: 33366-33865 Capsella grandiflora
Cagra.4686s0009 0.5kb downstream 0.5kb downstream 2687 true Scaffold4686: 33866-36552 Capsella grandiflora
Cagra.4686s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold4686: 36053-36552 Capsella grandiflora
Cagra.4686s0009 1.0kb upstream 1.0kb upstream 3187 true Scaffold4686: 32866-36052 Capsella grandiflora
Cagra.4686s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold4686: 32866-33865 Capsella grandiflora
Cagra.4686s0009 1.0kb downstream 1.0kb downstream 3187 true Scaffold4686: 33866-37052 Capsella grandiflora
Cagra.4686s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold4686: 36053-37052 Capsella grandiflora
Cagra.4686s0009 2.0kb upstream 2.0kb upstream 4187 true Scaffold4686: 31866-36052 Capsella grandiflora
Cagra.4686s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold4686: 31866-33865 Capsella grandiflora
Cagra.4686s0009 2.0kb downstream 2.0kb downstream 4187 true Scaffold4686: 33866-38052 Capsella grandiflora
Cagra.4686s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold4686: 36053-38052 Capsella grandiflora
Cagra.4686s0009 5.0kb upstream 5.0kb upstream 7187 true Scaffold4686: 28866-36052 Capsella grandiflora
Cagra.4686s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold4686: 28866-33865 Capsella grandiflora
Cagra.4686s0009 5.0kb downstream 5.0kb downstream 7187 true Scaffold4686: 33866-41052 Capsella grandiflora
Cagra.4686s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold4686: 36053-41052 Capsella grandiflora
Cagra.4686s0009 10.0kb upstream 10.0kb upstream 12187 true Scaffold4686: 23866-36052 Capsella grandiflora
Cagra.4686s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold4686: 23866-33865 Capsella grandiflora
Cagra.4686s0009 10.0kb downstream 10.0kb downstream 12187 true Scaffold4686: 33866-46052 Capsella grandiflora
Cagra.4686s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold4686: 36053-46052 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363502 5261 Brassicaceae View MSA
123835886 5264 Brassicales-Malvales View MSA
124348272 5266 SBM View MSA
124245895 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain