Gene : Cagra.6321s0004 C. grandiflora v1.1
Defline:  (1 of 47) PF00892 - EamA-like transporter family (EamA) Genomic Order:  4
Name:  ? Cagra.6321s0004 Secondary Identifier:  ? PAC:28916844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6321s0004 0.5kb upstream 0.5kb upstream 3731 true Scaffold6321: 9487-13217 Capsella grandiflora
Cagra.6321s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6321: 12718-13217 Capsella grandiflora
Cagra.6321s0004 0.5kb downstream 0.5kb downstream 3731 true Scaffold6321: 8987-12717 Capsella grandiflora
Cagra.6321s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6321: 8987-9486 Capsella grandiflora
Cagra.6321s0004 1.0kb upstream 1.0kb upstream 4231 true Scaffold6321: 9487-13717 Capsella grandiflora
Cagra.6321s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6321: 12718-13717 Capsella grandiflora
Cagra.6321s0004 1.0kb downstream 1.0kb downstream 4231 true Scaffold6321: 8487-12717 Capsella grandiflora
Cagra.6321s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6321: 8487-9486 Capsella grandiflora
Cagra.6321s0004 2.0kb upstream 2.0kb upstream 5231 true Scaffold6321: 9487-14717 Capsella grandiflora
Cagra.6321s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6321: 12718-14717 Capsella grandiflora
Cagra.6321s0004 2.0kb downstream 2.0kb downstream 5231 true Scaffold6321: 7487-12717 Capsella grandiflora
Cagra.6321s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6321: 7487-9486 Capsella grandiflora
Cagra.6321s0004 5.0kb upstream 5.0kb upstream 8231 true Scaffold6321: 9487-17717 Capsella grandiflora
Cagra.6321s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6321: 12718-17717 Capsella grandiflora
Cagra.6321s0004 5.0kb downstream 5.0kb downstream 8231 true Scaffold6321: 4487-12717 Capsella grandiflora
Cagra.6321s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6321: 4487-9486 Capsella grandiflora
Cagra.6321s0004 10.0kb upstream 10.0kb upstream 13231 true Scaffold6321: 9487-22717 Capsella grandiflora
Cagra.6321s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6321: 12718-22717 Capsella grandiflora
Cagra.6321s0004 10.0kb downstream 10.0kb downstream 12717 true Scaffold6321: 1-12717 Capsella grandiflora
Cagra.6321s0004 10.0kb downstream 10.0kb downstream 9486 false Scaffold6321: 1-9486 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361776 5261 Brassicaceae View MSA
123839059 5264 Brassicales-Malvales View MSA
124342021 5266 SBM View MSA
124253856 5268 Malvidae View MSA
124065362 5270 Rosid View MSA
123750992 5271 Pentapetalae View MSA
122796473 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain