Gene : Cagra.6333s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14154//PTHR14154:SF12 - UPF0041 BRAIN PROTEIN 44-RELATED Genomic Order:  6
Name:  ? Cagra.6333s0006 Secondary Identifier:  ? PAC:28913544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6333s0006 0.5kb upstream 0.5kb upstream 2692 true Scaffold6333: 23906-26597 Capsella grandiflora
Cagra.6333s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6333: 26098-26597 Capsella grandiflora
Cagra.6333s0006 0.5kb downstream 0.5kb downstream 2692 true Scaffold6333: 23406-26097 Capsella grandiflora
Cagra.6333s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6333: 23406-23905 Capsella grandiflora
Cagra.6333s0006 1.0kb upstream 1.0kb upstream 3192 true Scaffold6333: 23906-27097 Capsella grandiflora
Cagra.6333s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6333: 26098-27097 Capsella grandiflora
Cagra.6333s0006 1.0kb downstream 1.0kb downstream 3192 true Scaffold6333: 22906-26097 Capsella grandiflora
Cagra.6333s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6333: 22906-23905 Capsella grandiflora
Cagra.6333s0006 2.0kb upstream 2.0kb upstream 4192 true Scaffold6333: 23906-28097 Capsella grandiflora
Cagra.6333s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6333: 26098-28097 Capsella grandiflora
Cagra.6333s0006 2.0kb downstream 2.0kb downstream 4192 true Scaffold6333: 21906-26097 Capsella grandiflora
Cagra.6333s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6333: 21906-23905 Capsella grandiflora
Cagra.6333s0006 5.0kb upstream 5.0kb upstream 7192 true Scaffold6333: 23906-31097 Capsella grandiflora
Cagra.6333s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6333: 26098-31097 Capsella grandiflora
Cagra.6333s0006 5.0kb downstream 5.0kb downstream 7192 true Scaffold6333: 18906-26097 Capsella grandiflora
Cagra.6333s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6333: 18906-23905 Capsella grandiflora
Cagra.6333s0006 10.0kb upstream 10.0kb upstream 12192 true Scaffold6333: 23906-36097 Capsella grandiflora
Cagra.6333s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6333: 26098-36097 Capsella grandiflora
Cagra.6333s0006 10.0kb downstream 10.0kb downstream 12192 true Scaffold6333: 13906-26097 Capsella grandiflora
Cagra.6333s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6333: 13906-23905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366030 5261 Brassicaceae View MSA
123838735 5264 Brassicales-Malvales View MSA
124338871 5266 SBM View MSA
124251020 5268 Malvidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain