Gene : Cagra.6369s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21726//PTHR21726:SF36 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  9
Name:  ? Cagra.6369s0009 Secondary Identifier:  ? PAC:28913273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6369s0009 0.5kb upstream 0.5kb upstream 4803 true Scaffold6369: 41177-45979 Capsella grandiflora
Cagra.6369s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6369: 45480-45979 Capsella grandiflora
Cagra.6369s0009 0.5kb downstream 0.5kb downstream 4803 true Scaffold6369: 40677-45479 Capsella grandiflora
Cagra.6369s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6369: 40677-41176 Capsella grandiflora
Cagra.6369s0009 1.0kb upstream 1.0kb upstream 5303 true Scaffold6369: 41177-46479 Capsella grandiflora
Cagra.6369s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6369: 45480-46479 Capsella grandiflora
Cagra.6369s0009 1.0kb downstream 1.0kb downstream 5303 true Scaffold6369: 40177-45479 Capsella grandiflora
Cagra.6369s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6369: 40177-41176 Capsella grandiflora
Cagra.6369s0009 2.0kb upstream 2.0kb upstream 6303 true Scaffold6369: 41177-47479 Capsella grandiflora
Cagra.6369s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6369: 45480-47479 Capsella grandiflora
Cagra.6369s0009 2.0kb downstream 2.0kb downstream 6303 true Scaffold6369: 39177-45479 Capsella grandiflora
Cagra.6369s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6369: 39177-41176 Capsella grandiflora
Cagra.6369s0009 5.0kb upstream 5.0kb upstream 9303 true Scaffold6369: 41177-50479 Capsella grandiflora
Cagra.6369s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6369: 45480-50479 Capsella grandiflora
Cagra.6369s0009 5.0kb downstream 5.0kb downstream 9303 true Scaffold6369: 36177-45479 Capsella grandiflora
Cagra.6369s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold6369: 36177-41176 Capsella grandiflora
Cagra.6369s0009 10.0kb upstream 10.0kb upstream 9603 true Scaffold6369: 41177-50779 Capsella grandiflora
Cagra.6369s0009 10.0kb upstream 10.0kb upstream 5300 false Scaffold6369: 45480-50779 Capsella grandiflora
Cagra.6369s0009 10.0kb downstream 10.0kb downstream 14303 true Scaffold6369: 31177-45479 Capsella grandiflora
Cagra.6369s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold6369: 31177-41176 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363809 5261 Brassicaceae View MSA
123798619 5264 Brassicales-Malvales View MSA
124296230 5266 SBM View MSA
124148441 5268 Malvidae View MSA
123874433 5270 Rosid View MSA
123749692 5271 Pentapetalae View MSA
122785930 5272 Eudicot View MSA
122041731 5273 Angiosperm View MSA
121309884 5274 Embryophyte View MSA
123347522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain