Gene : Cagra.6396s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31471:SF13 - REMORIN-LIKE PROTEIN Genomic Order:  3
Name:  ? Cagra.6396s0003 Secondary Identifier:  ? PAC:28905964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6396s0003 0.5kb upstream 0.5kb upstream 3722 true Scaffold6396: 11191-14912 Capsella grandiflora
Cagra.6396s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6396: 11191-11690 Capsella grandiflora
Cagra.6396s0003 0.5kb downstream 0.5kb downstream 3570 true Scaffold6396: 11691-15260 Capsella grandiflora
Cagra.6396s0003 0.5kb downstream 0.5kb downstream 348 false Scaffold6396: 14913-15260 Capsella grandiflora
Cagra.6396s0003 1.0kb upstream 1.0kb upstream 4222 true Scaffold6396: 10691-14912 Capsella grandiflora
Cagra.6396s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6396: 10691-11690 Capsella grandiflora
Cagra.6396s0003 1.0kb downstream 1.0kb downstream 3570 true Scaffold6396: 11691-15260 Capsella grandiflora
Cagra.6396s0003 1.0kb downstream 1.0kb downstream 348 false Scaffold6396: 14913-15260 Capsella grandiflora
Cagra.6396s0003 2.0kb upstream 2.0kb upstream 5222 true Scaffold6396: 9691-14912 Capsella grandiflora
Cagra.6396s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6396: 9691-11690 Capsella grandiflora
Cagra.6396s0003 2.0kb downstream 2.0kb downstream 3570 true Scaffold6396: 11691-15260 Capsella grandiflora
Cagra.6396s0003 2.0kb downstream 2.0kb downstream 348 false Scaffold6396: 14913-15260 Capsella grandiflora
Cagra.6396s0003 5.0kb upstream 5.0kb upstream 8222 true Scaffold6396: 6691-14912 Capsella grandiflora
Cagra.6396s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6396: 6691-11690 Capsella grandiflora
Cagra.6396s0003 5.0kb downstream 5.0kb downstream 3570 true Scaffold6396: 11691-15260 Capsella grandiflora
Cagra.6396s0003 5.0kb downstream 5.0kb downstream 348 false Scaffold6396: 14913-15260 Capsella grandiflora
Cagra.6396s0003 10.0kb upstream 10.0kb upstream 13222 true Scaffold6396: 1691-14912 Capsella grandiflora
Cagra.6396s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6396: 1691-11690 Capsella grandiflora
Cagra.6396s0003 10.0kb downstream 10.0kb downstream 3570 true Scaffold6396: 11691-15260 Capsella grandiflora
Cagra.6396s0003 10.0kb downstream 10.0kb downstream 348 false Scaffold6396: 14913-15260 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375179 5261 Brassicaceae View MSA
123827736 5264 Brassicales-Malvales View MSA
124345041 5266 SBM View MSA
124244218 5268 Malvidae View MSA
124060988 5270 Rosid View MSA
123736964 5271 Pentapetalae View MSA
122788463 5272 Eudicot View MSA
122043924 5273 Angiosperm View MSA
121348920 5274 Embryophyte View MSA
123381079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain