Gene : Cagra.6400s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31917:SF20 - AGENET DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.6400s0006 Secondary Identifier:  ? PAC:28911898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6400s0006 0.5kb upstream 0.5kb upstream 3407 true Scaffold6400: 32721-36127 Capsella grandiflora
Cagra.6400s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6400: 32721-33220 Capsella grandiflora
Cagra.6400s0006 0.5kb downstream 0.5kb downstream 3407 true Scaffold6400: 33221-36627 Capsella grandiflora
Cagra.6400s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6400: 36128-36627 Capsella grandiflora
Cagra.6400s0006 1.0kb upstream 1.0kb upstream 3907 true Scaffold6400: 32221-36127 Capsella grandiflora
Cagra.6400s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6400: 32221-33220 Capsella grandiflora
Cagra.6400s0006 1.0kb downstream 1.0kb downstream 3907 true Scaffold6400: 33221-37127 Capsella grandiflora
Cagra.6400s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6400: 36128-37127 Capsella grandiflora
Cagra.6400s0006 2.0kb upstream 2.0kb upstream 4907 true Scaffold6400: 31221-36127 Capsella grandiflora
Cagra.6400s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6400: 31221-33220 Capsella grandiflora
Cagra.6400s0006 2.0kb downstream 2.0kb downstream 4907 true Scaffold6400: 33221-38127 Capsella grandiflora
Cagra.6400s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6400: 36128-38127 Capsella grandiflora
Cagra.6400s0006 5.0kb upstream 5.0kb upstream 7907 true Scaffold6400: 28221-36127 Capsella grandiflora
Cagra.6400s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6400: 28221-33220 Capsella grandiflora
Cagra.6400s0006 5.0kb downstream 5.0kb downstream 7907 true Scaffold6400: 33221-41127 Capsella grandiflora
Cagra.6400s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6400: 36128-41127 Capsella grandiflora
Cagra.6400s0006 10.0kb upstream 10.0kb upstream 12907 true Scaffold6400: 23221-36127 Capsella grandiflora
Cagra.6400s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6400: 23221-33220 Capsella grandiflora
Cagra.6400s0006 10.0kb downstream 10.0kb downstream 12907 true Scaffold6400: 33221-46127 Capsella grandiflora
Cagra.6400s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6400: 36128-46127 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378271 5261 Brassicaceae View MSA
123801809 5264 Brassicales-Malvales View MSA
124299068 5266 SBM View MSA
124251657 5268 Malvidae View MSA
124071836 5270 Rosid View MSA
123746152 5271 Pentapetalae View MSA
122796207 5272 Eudicot View MSA
122050823 5273 Angiosperm View MSA
121349360 5274 Embryophyte View MSA
123381286 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain