Gene : Cagra.6414s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10743:SF1 - PROTEIN RER1C Genomic Order:  2
Name:  ? Cagra.6414s0002 Secondary Identifier:  ? PAC:28898049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6414s0002 0.5kb upstream 0.5kb upstream 2002 true Scaffold6414: 8121-10122 Capsella grandiflora
Cagra.6414s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6414: 8121-8620 Capsella grandiflora
Cagra.6414s0002 0.5kb downstream 0.5kb downstream 2002 true Scaffold6414: 8621-10622 Capsella grandiflora
Cagra.6414s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6414: 10123-10622 Capsella grandiflora
Cagra.6414s0002 1.0kb upstream 1.0kb upstream 2502 true Scaffold6414: 7621-10122 Capsella grandiflora
Cagra.6414s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6414: 7621-8620 Capsella grandiflora
Cagra.6414s0002 1.0kb downstream 1.0kb downstream 2502 true Scaffold6414: 8621-11122 Capsella grandiflora
Cagra.6414s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6414: 10123-11122 Capsella grandiflora
Cagra.6414s0002 2.0kb upstream 2.0kb upstream 3502 true Scaffold6414: 6621-10122 Capsella grandiflora
Cagra.6414s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6414: 6621-8620 Capsella grandiflora
Cagra.6414s0002 2.0kb downstream 2.0kb downstream 3502 true Scaffold6414: 8621-12122 Capsella grandiflora
Cagra.6414s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6414: 10123-12122 Capsella grandiflora
Cagra.6414s0002 5.0kb upstream 5.0kb upstream 6502 true Scaffold6414: 3621-10122 Capsella grandiflora
Cagra.6414s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6414: 3621-8620 Capsella grandiflora
Cagra.6414s0002 5.0kb downstream 5.0kb downstream 6502 true Scaffold6414: 8621-15122 Capsella grandiflora
Cagra.6414s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6414: 10123-15122 Capsella grandiflora
Cagra.6414s0002 10.0kb upstream 10.0kb upstream 10122 true Scaffold6414: 1-10122 Capsella grandiflora
Cagra.6414s0002 10.0kb upstream 10.0kb upstream 8620 false Scaffold6414: 1-8620 Capsella grandiflora
Cagra.6414s0002 10.0kb downstream 10.0kb downstream 11502 true Scaffold6414: 8621-20122 Capsella grandiflora
Cagra.6414s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6414: 10123-20122 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372549 5261 Brassicaceae View MSA
123836456 5264 Brassicales-Malvales View MSA
124341689 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain