Gene : Cagra.6420s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24349:SF83 - CALCIUM-DEPENDENT PROTEIN KINASE 6 Genomic Order:  1
Name:  ? Cagra.6420s0001 Secondary Identifier:  ? PAC:28897265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6420s0001 0.5kb upstream 0.5kb upstream 3697 true Scaffold6420: 1120-4816 Capsella grandiflora
Cagra.6420s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6420: 4317-4816 Capsella grandiflora
Cagra.6420s0001 0.5kb downstream 0.5kb downstream 3697 true Scaffold6420: 620-4316 Capsella grandiflora
Cagra.6420s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6420: 620-1119 Capsella grandiflora
Cagra.6420s0001 1.0kb upstream 1.0kb upstream 4197 true Scaffold6420: 1120-5316 Capsella grandiflora
Cagra.6420s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6420: 4317-5316 Capsella grandiflora
Cagra.6420s0001 1.0kb downstream 1.0kb downstream 4197 true Scaffold6420: 120-4316 Capsella grandiflora
Cagra.6420s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6420: 120-1119 Capsella grandiflora
Cagra.6420s0001 2.0kb upstream 2.0kb upstream 5197 true Scaffold6420: 1120-6316 Capsella grandiflora
Cagra.6420s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6420: 4317-6316 Capsella grandiflora
Cagra.6420s0001 2.0kb downstream 2.0kb downstream 4316 true Scaffold6420: 1-4316 Capsella grandiflora
Cagra.6420s0001 2.0kb downstream 2.0kb downstream 1119 false Scaffold6420: 1-1119 Capsella grandiflora
Cagra.6420s0001 5.0kb upstream 5.0kb upstream 8197 true Scaffold6420: 1120-9316 Capsella grandiflora
Cagra.6420s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6420: 4317-9316 Capsella grandiflora
Cagra.6420s0001 5.0kb downstream 5.0kb downstream 4316 true Scaffold6420: 1-4316 Capsella grandiflora
Cagra.6420s0001 5.0kb downstream 5.0kb downstream 1119 false Scaffold6420: 1-1119 Capsella grandiflora
Cagra.6420s0001 10.0kb upstream 10.0kb upstream 13197 true Scaffold6420: 1120-14316 Capsella grandiflora
Cagra.6420s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold6420: 4317-14316 Capsella grandiflora
Cagra.6420s0001 10.0kb downstream 10.0kb downstream 4316 true Scaffold6420: 1-4316 Capsella grandiflora
Cagra.6420s0001 10.0kb downstream 10.0kb downstream 1119 false Scaffold6420: 1-1119 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366889 5261 Brassicaceae View MSA
123836645 5264 Brassicales-Malvales View MSA
124343015 5266 SBM View MSA
124247953 5268 Malvidae View MSA
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain