Gene : Cagra.6197s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10257:SF26 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM Genomic Order:  9
Name:  ? Cagra.6197s0009 Secondary Identifier:  ? PAC:28915315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6197s0009 0.5kb upstream 0.5kb upstream 3537 true Scaffold6197: 16381-19917 Capsella grandiflora
Cagra.6197s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6197: 19418-19917 Capsella grandiflora
Cagra.6197s0009 0.5kb downstream 0.5kb downstream 3537 true Scaffold6197: 15881-19417 Capsella grandiflora
Cagra.6197s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6197: 15881-16380 Capsella grandiflora
Cagra.6197s0009 1.0kb upstream 1.0kb upstream 4037 true Scaffold6197: 16381-20417 Capsella grandiflora
Cagra.6197s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6197: 19418-20417 Capsella grandiflora
Cagra.6197s0009 1.0kb downstream 1.0kb downstream 4037 true Scaffold6197: 15381-19417 Capsella grandiflora
Cagra.6197s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6197: 15381-16380 Capsella grandiflora
Cagra.6197s0009 2.0kb upstream 2.0kb upstream 5037 true Scaffold6197: 16381-21417 Capsella grandiflora
Cagra.6197s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6197: 19418-21417 Capsella grandiflora
Cagra.6197s0009 2.0kb downstream 2.0kb downstream 5037 true Scaffold6197: 14381-19417 Capsella grandiflora
Cagra.6197s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6197: 14381-16380 Capsella grandiflora
Cagra.6197s0009 5.0kb upstream 5.0kb upstream 8037 true Scaffold6197: 16381-24417 Capsella grandiflora
Cagra.6197s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6197: 19418-24417 Capsella grandiflora
Cagra.6197s0009 5.0kb downstream 5.0kb downstream 8037 true Scaffold6197: 11381-19417 Capsella grandiflora
Cagra.6197s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold6197: 11381-16380 Capsella grandiflora
Cagra.6197s0009 10.0kb upstream 10.0kb upstream 13037 true Scaffold6197: 16381-29417 Capsella grandiflora
Cagra.6197s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold6197: 19418-29417 Capsella grandiflora
Cagra.6197s0009 10.0kb downstream 10.0kb downstream 13037 true Scaffold6197: 6381-19417 Capsella grandiflora
Cagra.6197s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold6197: 6381-16380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368622 5261 Brassicaceae View MSA
123836644 5264 Brassicales-Malvales View MSA
124345623 5266 SBM View MSA
124246599 5268 Malvidae View MSA
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain