Gene : Cagra.6206s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  1
Name:  ? Cagra.6206s0001 Secondary Identifier:  ? PAC:28896206
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5381 Capsella grandiflora pathologic  
Cgrandiflora PWY-5695 Capsella grandiflora pathologic  
Cgrandiflora PWY-6596 Capsella grandiflora pathologic  
Cgrandiflora PWY-6606 Capsella grandiflora pathologic  
Cgrandiflora PWY-6608 Capsella grandiflora pathologic  
Cgrandiflora PWY-7185 Capsella grandiflora pathologic  
Cgrandiflora SALVADEHYPOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6206s0001 0.5kb upstream 0.5kb upstream 4079 true Scaffold6206: 1044-5122 Capsella grandiflora
Cagra.6206s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6206: 1044-1543 Capsella grandiflora
Cagra.6206s0001 0.5kb downstream 0.5kb downstream 4079 true Scaffold6206: 1544-5622 Capsella grandiflora
Cagra.6206s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6206: 5123-5622 Capsella grandiflora
Cagra.6206s0001 1.0kb upstream 1.0kb upstream 4579 true Scaffold6206: 544-5122 Capsella grandiflora
Cagra.6206s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6206: 544-1543 Capsella grandiflora
Cagra.6206s0001 1.0kb downstream 1.0kb downstream 4579 true Scaffold6206: 1544-6122 Capsella grandiflora
Cagra.6206s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6206: 5123-6122 Capsella grandiflora
Cagra.6206s0001 2.0kb upstream 2.0kb upstream 5122 true Scaffold6206: 1-5122 Capsella grandiflora
Cagra.6206s0001 2.0kb upstream 2.0kb upstream 1543 false Scaffold6206: 1-1543 Capsella grandiflora
Cagra.6206s0001 2.0kb downstream 2.0kb downstream 5579 true Scaffold6206: 1544-7122 Capsella grandiflora
Cagra.6206s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6206: 5123-7122 Capsella grandiflora
Cagra.6206s0001 5.0kb upstream 5.0kb upstream 5122 true Scaffold6206: 1-5122 Capsella grandiflora
Cagra.6206s0001 5.0kb upstream 5.0kb upstream 1543 false Scaffold6206: 1-1543 Capsella grandiflora
Cagra.6206s0001 5.0kb downstream 5.0kb downstream 8579 true Scaffold6206: 1544-10122 Capsella grandiflora
Cagra.6206s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6206: 5123-10122 Capsella grandiflora
Cagra.6206s0001 10.0kb upstream 10.0kb upstream 5122 true Scaffold6206: 1-5122 Capsella grandiflora
Cagra.6206s0001 10.0kb upstream 10.0kb upstream 1543 false Scaffold6206: 1-1543 Capsella grandiflora
Cagra.6206s0001 10.0kb downstream 10.0kb downstream 11035 true Scaffold6206: 1544-12578 Capsella grandiflora
Cagra.6206s0001 10.0kb downstream 10.0kb downstream 7456 false Scaffold6206: 5123-12578 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369705 5261 Brassicaceae View MSA
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain