Gene : Cagra.6254s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10060 - TATD FAMILY DEOXYRIBONUCLEASE Genomic Order:  3
Name:  ? Cagra.6254s0003 Secondary Identifier:  ? PAC:28897599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0003 0.5kb upstream 0.5kb upstream 2245 true Scaffold6254: 5877-8121 Capsella grandiflora
Cagra.6254s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 5877-6376 Capsella grandiflora
Cagra.6254s0003 0.5kb downstream 0.5kb downstream 2245 true Scaffold6254: 6377-8621 Capsella grandiflora
Cagra.6254s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 8122-8621 Capsella grandiflora
Cagra.6254s0003 1.0kb upstream 1.0kb upstream 2745 true Scaffold6254: 5377-8121 Capsella grandiflora
Cagra.6254s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 5377-6376 Capsella grandiflora
Cagra.6254s0003 1.0kb downstream 1.0kb downstream 2745 true Scaffold6254: 6377-9121 Capsella grandiflora
Cagra.6254s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 8122-9121 Capsella grandiflora
Cagra.6254s0003 2.0kb upstream 2.0kb upstream 3745 true Scaffold6254: 4377-8121 Capsella grandiflora
Cagra.6254s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 4377-6376 Capsella grandiflora
Cagra.6254s0003 2.0kb downstream 2.0kb downstream 3745 true Scaffold6254: 6377-10121 Capsella grandiflora
Cagra.6254s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 8122-10121 Capsella grandiflora
Cagra.6254s0003 5.0kb upstream 5.0kb upstream 6745 true Scaffold6254: 1377-8121 Capsella grandiflora
Cagra.6254s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 1377-6376 Capsella grandiflora
Cagra.6254s0003 5.0kb downstream 5.0kb downstream 6745 true Scaffold6254: 6377-13121 Capsella grandiflora
Cagra.6254s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 8122-13121 Capsella grandiflora
Cagra.6254s0003 10.0kb upstream 10.0kb upstream 8121 true Scaffold6254: 1-8121 Capsella grandiflora
Cagra.6254s0003 10.0kb upstream 10.0kb upstream 6376 false Scaffold6254: 1-6376 Capsella grandiflora
Cagra.6254s0003 10.0kb downstream 10.0kb downstream 11745 true Scaffold6254: 6377-18121 Capsella grandiflora
Cagra.6254s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 8122-18121 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362117 5261 Brassicaceae View MSA
123831019 5264 Brassicales-Malvales View MSA
124343445 5266 SBM View MSA
124238522 5268 Malvidae View MSA
124061063 5270 Rosid View MSA
123739501 5271 Pentapetalae View MSA
122793649 5272 Eudicot View MSA
122041796 5273 Angiosperm View MSA
121347272 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain