Gene : Cagra.6254s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11206:SF154 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  16
Name:  ? Cagra.6254s0016 Secondary Identifier:  ? PAC:28897582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0016 0.5kb upstream 0.5kb upstream 3557 true Scaffold6254: 44343-47899 Capsella grandiflora
Cagra.6254s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 47400-47899 Capsella grandiflora
Cagra.6254s0016 0.5kb downstream 0.5kb downstream 3557 true Scaffold6254: 43843-47399 Capsella grandiflora
Cagra.6254s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 43843-44342 Capsella grandiflora
Cagra.6254s0016 1.0kb upstream 1.0kb upstream 4057 true Scaffold6254: 44343-48399 Capsella grandiflora
Cagra.6254s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 47400-48399 Capsella grandiflora
Cagra.6254s0016 1.0kb downstream 1.0kb downstream 4057 true Scaffold6254: 43343-47399 Capsella grandiflora
Cagra.6254s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 43343-44342 Capsella grandiflora
Cagra.6254s0016 2.0kb upstream 2.0kb upstream 5057 true Scaffold6254: 44343-49399 Capsella grandiflora
Cagra.6254s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 47400-49399 Capsella grandiflora
Cagra.6254s0016 2.0kb downstream 2.0kb downstream 5057 true Scaffold6254: 42343-47399 Capsella grandiflora
Cagra.6254s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 42343-44342 Capsella grandiflora
Cagra.6254s0016 5.0kb upstream 5.0kb upstream 8057 true Scaffold6254: 44343-52399 Capsella grandiflora
Cagra.6254s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 47400-52399 Capsella grandiflora
Cagra.6254s0016 5.0kb downstream 5.0kb downstream 8057 true Scaffold6254: 39343-47399 Capsella grandiflora
Cagra.6254s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 39343-44342 Capsella grandiflora
Cagra.6254s0016 10.0kb upstream 10.0kb upstream 13057 true Scaffold6254: 44343-57399 Capsella grandiflora
Cagra.6254s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 47400-57399 Capsella grandiflora
Cagra.6254s0016 10.0kb downstream 10.0kb downstream 13057 true Scaffold6254: 34343-47399 Capsella grandiflora
Cagra.6254s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 34343-44342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376182 5261 Brassicaceae View MSA
123839993 5264 Brassicales-Malvales View MSA
124339078 5266 SBM View MSA
124249163 5268 Malvidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain