Gene : Cagra.6254s0024 C. grandiflora v1.1
Defline:  (1 of 6) 2.3.1.12 - Dihydrolipoyllysine-residue acetyltransferase / Transacetylase X Genomic Order:  24
Name:  ? Cagra.6254s0024 Secondary Identifier:  ? PAC:28897609
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5173 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PYRUVDEHYD-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0024 0.5kb upstream 0.5kb upstream 1934 true Scaffold6254: 73871-75804 Capsella grandiflora
Cagra.6254s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 75305-75804 Capsella grandiflora
Cagra.6254s0024 0.5kb downstream 0.5kb downstream 1934 true Scaffold6254: 73371-75304 Capsella grandiflora
Cagra.6254s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 73371-73870 Capsella grandiflora
Cagra.6254s0024 1.0kb upstream 1.0kb upstream 2434 true Scaffold6254: 73871-76304 Capsella grandiflora
Cagra.6254s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 75305-76304 Capsella grandiflora
Cagra.6254s0024 1.0kb downstream 1.0kb downstream 2434 true Scaffold6254: 72871-75304 Capsella grandiflora
Cagra.6254s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 72871-73870 Capsella grandiflora
Cagra.6254s0024 2.0kb upstream 2.0kb upstream 3434 true Scaffold6254: 73871-77304 Capsella grandiflora
Cagra.6254s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 75305-77304 Capsella grandiflora
Cagra.6254s0024 2.0kb downstream 2.0kb downstream 3434 true Scaffold6254: 71871-75304 Capsella grandiflora
Cagra.6254s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 71871-73870 Capsella grandiflora
Cagra.6254s0024 5.0kb upstream 5.0kb upstream 6434 true Scaffold6254: 73871-80304 Capsella grandiflora
Cagra.6254s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 75305-80304 Capsella grandiflora
Cagra.6254s0024 5.0kb downstream 5.0kb downstream 6434 true Scaffold6254: 68871-75304 Capsella grandiflora
Cagra.6254s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 68871-73870 Capsella grandiflora
Cagra.6254s0024 10.0kb upstream 10.0kb upstream 11434 true Scaffold6254: 73871-85304 Capsella grandiflora
Cagra.6254s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 75305-85304 Capsella grandiflora
Cagra.6254s0024 10.0kb downstream 10.0kb downstream 11434 true Scaffold6254: 63871-75304 Capsella grandiflora
Cagra.6254s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 63871-73870 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371700 5261 Brassicaceae View MSA
123838380 5264 Brassicales-Malvales View MSA
124343466 5266 SBM View MSA
124244385 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain