Gene : Cagra.6254s0028 C. grandiflora v1.1
Defline:  (1 of 76) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  28
Name:  ? Cagra.6254s0028 Secondary Identifier:  ? PAC:28897591
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0028 0.5kb upstream 0.5kb upstream 1862 true Scaffold6254: 92547-94408 Capsella grandiflora
Cagra.6254s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 93909-94408 Capsella grandiflora
Cagra.6254s0028 0.5kb downstream 0.5kb downstream 1862 true Scaffold6254: 92047-93908 Capsella grandiflora
Cagra.6254s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 92047-92546 Capsella grandiflora
Cagra.6254s0028 1.0kb upstream 1.0kb upstream 2362 true Scaffold6254: 92547-94908 Capsella grandiflora
Cagra.6254s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 93909-94908 Capsella grandiflora
Cagra.6254s0028 1.0kb downstream 1.0kb downstream 2362 true Scaffold6254: 91547-93908 Capsella grandiflora
Cagra.6254s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 91547-92546 Capsella grandiflora
Cagra.6254s0028 2.0kb upstream 2.0kb upstream 3362 true Scaffold6254: 92547-95908 Capsella grandiflora
Cagra.6254s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 93909-95908 Capsella grandiflora
Cagra.6254s0028 2.0kb downstream 2.0kb downstream 3362 true Scaffold6254: 90547-93908 Capsella grandiflora
Cagra.6254s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 90547-92546 Capsella grandiflora
Cagra.6254s0028 5.0kb upstream 5.0kb upstream 6362 true Scaffold6254: 92547-98908 Capsella grandiflora
Cagra.6254s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 93909-98908 Capsella grandiflora
Cagra.6254s0028 5.0kb downstream 5.0kb downstream 6362 true Scaffold6254: 87547-93908 Capsella grandiflora
Cagra.6254s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 87547-92546 Capsella grandiflora
Cagra.6254s0028 10.0kb upstream 10.0kb upstream 11362 true Scaffold6254: 92547-103908 Capsella grandiflora
Cagra.6254s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 93909-103908 Capsella grandiflora
Cagra.6254s0028 10.0kb downstream 10.0kb downstream 11362 true Scaffold6254: 82547-93908 Capsella grandiflora
Cagra.6254s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 82547-92546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373826 5261 Brassicaceae View MSA
123836996 5264 Brassicales-Malvales View MSA
124350578 5266 SBM View MSA
124246805 5268 Malvidae View MSA
124051258 5270 Rosid View MSA
123745687 5271 Pentapetalae View MSA
122794580 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain